PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG032620.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 539aa MW: 61474 Da PI: 10.551

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG032620.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.1	0.00077	474	503	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 rr+++ +E +RR+ +N+ ++ Lr + k+ TRIDC5BG032620.9 474 RRAMARSIELQRREALNHHISVLRHKIWKL 503 7999********************999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
VNQDRTGGTV IWRSGRSIVL YRGMNYNLRC VQSYTKIAEV DSSENAGDAI GLVPSSEERN 60 LQKPTVEHDL QKPIVERNSQ KSSADDVKRS KSIMNFSQEA TETFDIDSFL DQLGPRYKDW 120 SGRSPIPVDA DLLPGLVPGY KPPFRQLPYR TKISLKDKEM TALRRLARQT APHFALGRNR 180 EHQGLAAAIV KVWEKSSIVK IAIKRGVPNT CNDRMAEEIK KLTGGVLVSR NKEYIIFYRG 240 NDFVTPKVRK VLVEQQQHAI TQQEQEELAR LKASASITPI PKALKNPLVA GTLAETREAT 300 FRWGDSLNDE LRKKENNRLI LAKHTSLLKN MKRKLILAKT KVAKAEMALA KVQEYLSPAE 360 LPTDLETVTD EERFLFRIIG LKMKAFLMLG RREVFDGTVQ NMHFHWKHRE LVKIVVKGKT 420 FEQVKHIAIS LEAESGGVLI ALDKTTKGYS IIFYRGKNYK RPQVLKPRNL LTRRRAMARS 480 IELQRREALN HHISVLRHKI WKLKSQLVQM RAAGRKQDAE LLQTVEDDLS SDDDNIQST

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

VNQDRTGGTV IWRSGRSIVL YRGMNYNLRC VQSYTKIAEV DSSENAGDAI GLVPSSEERN  60
LQKPTVEHDL QKPIVERNSQ KSSADDVKRS KSIMNFSQEA TETFDIDSFL DQLGPRYKDW  120
SGRSPIPVDA DLLPGLVPGY KPPFRQLPYR TKISLKDKEM TALRRLARQT APHFALGRNR  180
EHQGLAAAIV KVWEKSSIVK IAIKRGVPNT CNDRMAEEIK KLTGGVLVSR NKEYIIFYRG  240
NDFVTPKVRK VLVEQQQHAI TQQEQEELAR LKASASITPI PKALKNPLVA GTLAETREAT  300
FRWGDSLNDE LRKKENNRLI LAKHTSLLKN MKRKLILAKT KVAKAEMALA KVQEYLSPAE  360
LPTDLETVTD EERFLFRIIG LKMKAFLMLG RREVFDGTVQ NMHFHWKHRE LVKIVVKGKT  420
FEQVKHIAIS LEAESGGVLI ALDKTTKGYS IIFYRGKNYK RPQVLKPRNL LTRRRAMARS  480
IELQRREALN HHISVLRHKI WKLKSQLVQM RAAGRKQDAE LLQTVEDDLS SDDDNIQST

Link Out ? help Back to Top
Ensembl	TRIDC5BG032620.9