PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG031790.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 339aa MW: 36913.2 Da PI: 6.3172 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 86.2 | 2.9e-27 | 121 | 181 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqK++ g+++pr+YYrCt++ gC ++k+v+r++edp +++++Y+geH++ TRIDC5BG031790.3 121 VDDGHSWRKYGQKDILGAKHPRGYYRCTHRksqGCAATKQVQRADEDPALFDVIYHGEHTC 181 59***************************98899*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 339 aa Download sequence |
MESVDENGGS RLVVTELGYI KELVRQLDVN LGGCPDHCKR LAAQIFAVTE RSIGMIRSGH 60 FDSRKRSAAG LDSPPFSATP SPLSDVSGMP FHTNNKKRKT MEKRKHQVRV SSEGGGAETP 120 VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPAL FDVIYHGEHT 180 CVHKTVAAAA AMVQPAEENP DARRHLQNLS TSLTVNTEGL TAGHQGCSTT TSFCFSSQAA 240 GVLTTPQEHY PFSMPSTPEN CFGQGASLST SLEPSPVTSD SNRFSMSPFQ AEWRARSEYD 300 EVVSALVAAG TMPALAMEME EEAAFSLDEF EFDVSCFLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G11070.2 | 4e-36 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG031790.3 |