PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG030630.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 279aa MW: 30235.5 Da PI: 6.4253

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG030630.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.9	1.9e-32	16	70	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt eLHe+Fveav+qLGG+++AtPk +l++m+ +gLt++hvkSHLQkYRl TRIDC5BG030630.2 16 RQRLRWTDELHEQFVEAVTQLGGPDRATPKGVLRIMGTPGLTIYHVKSHLQKYRL 70 58****************************************************8 PP
2	Myb_DNA-binding	62.6	7.8e-20	18	69	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+av+qlGg+ t+k + r mg g+t +++ks++qky+ TRIDC5BG030630.2 18 RLRWTDELHEQFVEAVTQLGGPdraTPKGVLRIMGtPGLTIYHVKSHLQKYR 69 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGSNDGPNSK ASLAARQRLR WTDELHEQFV EAVTQLGGPD RATPKGVLRI MGTPGLTIYH 60 VKSHLQKYRL AKYIPDSSAD GNKADNKDPG DSLAGLDGSS GMQISEALKL QMEVQKRLHE 120 QLEVQRQLQL RIEAQGKYLK KIIEEQQRFG GGGIKSETPG AGATVTVSSD QFPDSERTDP 180 STPAPTSESA SQGGAFKRDS GSQTEAIKSP CHDEPLLTAD SNCHPGSPTL SPKHERAAKR 240 QRGSDAEFPE AELSLPQHIF ESSSGPEFQQ CSVPYYSGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	5e-61	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG030630.2