PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC5BG025270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 411aa MW: 45523 Da PI: 6.8304

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG025270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.6e-52	67	194	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+v+yL +++++ + ++ +i+ev+iyk++PwdLp k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++l TRIDC5BG025270.1 67 LPPGFRFHPTDEELIVHYLGRQAASMPSPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAIL 158 79***********************999.88***********8777899********************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +e +g+kk Lvfy+g+ pkg+ktdW+mheyrl TRIDC5BG025270.1 159 STpANESIGVKKALVFYRGKPPKGVKTDWIMHEYRL 194 9988899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
LPPINTTPHS ISYAVAIFSS SSPRLPASHL AHYHIIQQPT PTHIDSVPTC SPSPAMPMGS 60 SAAMPALPPG FRFHPTDEEL IVHYLGRQAA SMPSPVPIIA EVNIYKCNPW DLPGKALFGE 120 NEWYFFSPRD RKYPNGARPN RAAGSGYWKA TGTDKAILST PANESIGVKK ALVFYRGKPP 180 KGVKTDWIMH EYRLTAADNR TTKRRGSSMR LDDWVLCRIH KKCGNLPNFS SSDHEQEHEQ 240 ESSTVEDSQN NHTVSSPKSE AFDGDGDDQL QLQQFRPMAI AKSCSLTDLL NTVDYAALSH 300 LLLDGAGASL SDAGADYQLP PENPLIYSQP PWQQTLHYNN NNNGYVNNDT IDVPQLPEAR 360 VDDYGMNGDK YNGMKRKRSS GSLYCSQLQL PADQYSSGML IHPFLSQQLH M

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

LPPINTTPHS ISYAVAIFSS SSPRLPASHL AHYHIIQQPT PTHIDSVPTC SPSPAMPMGS  60
SAAMPALPPG FRFHPTDEEL IVHYLGRQAA SMPSPVPIIA EVNIYKCNPW DLPGKALFGE  120
NEWYFFSPRD RKYPNGARPN RAAGSGYWKA TGTDKAILST PANESIGVKK ALVFYRGKPP  180
KGVKTDWIMH EYRLTAADNR TTKRRGSSMR LDDWVLCRIH KKCGNLPNFS SSDHEQEHEQ  240
ESSTVEDSQN NHTVSSPKSE AFDGDGDDQL QLQQFRPMAI AKSCSLTDLL NTVDYAALSH  300
LLLDGAGASL SDAGADYQLP PENPLIYSQP PWQQTLHYNN NNNGYVNNDT IDVPQLPEAR  360
VDDYGMNGDK YNGMKRKRSS GSLYCSQLQL PADQYSSGML IHPFLSQQLH M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-77	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG025270.1