PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG025260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 330aa    MW: 36083.4 Da    PI: 8.8199
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG025260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.32.7e-3127854129
               NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +ekewyfF+++d ky+tg+r+nratk+gyWkatgkd+e+++   +elvg+kktLvfy+grap+g k++Wvmhe+rle
  TRIDC5BG025260.1   2 GEKEWYFFVHKDLKYPTGSRANRATKEGYWKATGKDREIFKPrARELVGMKKTLVFYTGRAPRGAKSEWVMHEFRLE 78 
                       578*************************************9867788***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGEKEWYFFV HKDLKYPTGS RANRATKEGY WKATGKDREI FKPRARELVG MKKTLVFYTG  60
RAPRGAKSEW VMHEFRLEGK SRGQTMNNPK DEWVVCKVFN KKGEVKATRA ADVDAEYSAV  120
TTPNASSVVD AGEGAGDFTD SMFTIDPLCY IPNSDEYTSN QLPTKTTATT TNSAPPPYNA  180
DYYYPSVPTT AGSFNLMSNY SLTNVPSNAQ TSTAMASSVP AISGSSWQHM LMNTAPHGMM  240
SRRSYDVNLH EQQAIMMRAL EGVVGAQNFG EPAKGLQTPS SRVTAGSVLP QQGKLGSYDD  300
GELPYGNYDL ASAAMTGRPA AANNLGARFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.19e-44NAC family protein