PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG024740.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 734aa    MW: 82687.4 Da    PI: 6.9795
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG024740.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.52e-1163597301374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av+++d + a++lL+++++++  +gd  qRla++f+++L+arla+++s+ y+ l +++t+    s+ l+ ++l++ ++P+ ++
  TRIDC5BG024740.4 359 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKGYHLYFAACPFKRL 448
                       5789************************************************************999999...8999**************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       sh++ Nq+Il  ++++++vHiiDf+i  GlQWp+L++ L++R++gpp lRiTg++ pe+g   +e++eetg+rLa++A++++vpfe++  +a+
  TRIDC5BG024740.4 449 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 540
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++ e+L+v ++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+lea++pr
  TRIDC5BG024740.4 541 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 633
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++
  TRIDC5BG024740.4 634 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 726
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       + W+
  TRIDC5BG024740.4 727 TTWK 730
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 734 aa     Download sequence    
LQRSSSVEHQ TISGSLIHSM IQFCGAPEYF MFNDPQPVIP HHVAAEPSHN APVATLSRAT  60
NTETDNPEDW EFISDESLNY ISRMLMEEDI DEKVSVYQEE SATLRATAKP FYDILGHKFP  120
PSPDRTLTTW SLDSPSESSS SGHAQSLSSV GTSGSIGGAV HSNQCHNVGH SEQLEAYRGL  180
CGRSSQPLVA PSSGVSDAAE SLEDPLITNG RIPEYLFESL PTWDFRRGVE EAQKFLPGGD  240
KLVIDLEAAG VSKPQEAVKA IPFNVSRTEV LKAKKNRQSE DLDLIEGRNI KQSAFCSDEP  300
DDWVEMFDDL FRQTEKKATV LREKMRSEAS KNSQVTQAKG TTGVKTRGRK PTKNDVVDLR  360
TILIHCAQAV AADDRRTANE LLKQIKQHSK VNGDGSQRLA FCFAQGLEAR LAGTGSQQYH  420
RLVAKRTTAS DMLKGYHLYF AACPFKRLSH FLSNQTILSM TKNAKKVHII DFGIYFGLQW  480
PCLIRRLSKR EGGPPILRIT GIDVPEPGFR PTERIEETGQ RLAEYAKKFE VPFEYHGIAS  540
KWETIRAEDL KVGKDEVVIV NCLYRFRNLI DETVAVDSPR NRVLNTIRQV NPAIFIHGIV  600
NGSYSVPFFI TRFREALFHF SALFDMLEAT VPRDDDQRRL IERDLFGREA LNVIACEGSD  660
RVERPETYKQ WQVRNLRAGF VQSPLNQDIV IKAKDKVKDI YHKDFVIDED SGWLLQGWKG  720
RIIYAITTWK HNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-173GRAS family protein