PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG024740.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 715aa    MW: 80639.1 Da    PI: 6.9264
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG024740.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.61.9e-1163407111374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av+++d + a++lL+++++++  +gd  qRla++f+++L+arla+++s+ y+ l +++t+    s+ l+ ++l++ ++P+ ++
  TRIDC5BG024740.2 340 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKGYHLYFAACPFKRL 429
                       5789************************************************************999999...8999**************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       sh++ Nq+Il  ++++++vHiiDf+i  GlQWp+L++ L++R++gpp lRiTg++ pe+g   +e++eetg+rLa++A++++vpfe++  +a+
  TRIDC5BG024740.2 430 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 521
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++ e+L+v ++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+lea++pr
  TRIDC5BG024740.2 522 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 614
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++
  TRIDC5BG024740.2 615 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 707
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       + W+
  TRIDC5BG024740.2 708 TTWK 711
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MIQFCGAPEY FMFNDPQPVI PHHVAAEPSH NAPVATLSRA TNTETDNPED WEFISDESLN  60
YISRMLMEED IDEKVSVYQE ESATLRATAK PFYDILGHKF PPSPDRTLTT WSLDSPSESS  120
SSGHAQSLSS VGTSGSIGGA VHSNQCHNVG HSEQLEAYRG LCGRSSQPLV APSSGVSDAA  180
ESLEDPLITN GRIPEYLFES LPTWDFRRGV EEAQKFLPGG DKLVIDLEAA GVSKPQEAVK  240
AIPFNVSRTE VLKAKKNRQS EDLDLIEGRN IKQSAFCSDE PDDWVEMFDD LFRQTEKKAT  300
VLREKMRSEA SKNSQVTQAK GTTGVKTRGR KPTKNDVVDL RTILIHCAQA VAADDRRTAN  360
ELLKQIKQHS KVNGDGSQRL AFCFAQGLEA RLAGTGSQQY HRLVAKRTTA SDMLKGYHLY  420
FAACPFKRLS HFLSNQTILS MTKNAKKVHI IDFGIYFGLQ WPCLIRRLSK REGGPPILRI  480
TGIDVPEPGF RPTERIEETG QRLAEYAKKF EVPFEYHGIA SKWETIRAED LKVGKDEVVI  540
VNCLYRFRNL IDETVAVDSP RNRVLNTIRQ VNPAIFIHGI VNGSYSVPFF ITRFREALFH  600
FSALFDMLEA TVPRDDDQRR LIERDLFGRE ALNVIACEGS DRVERPETYK QWQVRNLRAG  660
FVQSPLNQDI VIKAKDKVKD IYHKDFVIDE DSGWLLQGWK GRIIYAITTW KHNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-173GRAS family protein