PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG024740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 736aa    MW: 82760.4 Da    PI: 6.8841
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG024740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.52e-1163617321374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av+++d + a++lL+++++++  +gd  qRla++f+++L+arla+++s+ y+ l +++t+    s+ l+ ++l++ ++P+ ++
  TRIDC5BG024740.1 361 LRTILIHCAQAVAADDRRTANELLKQIKQHSKVNGDGSQRLAFCFAQGLEARLAGTGSQQYHRLVAKRTT---ASDMLKGYHLYFAACPFKRL 450
                       5789************************************************************999999...8999**************** PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       sh++ Nq+Il  ++++++vHiiDf+i  GlQWp+L++ L++R++gpp lRiTg++ pe+g   +e++eetg+rLa++A++++vpfe++  +a+
  TRIDC5BG024740.1 451 SHFLSNQTILSMTKNAKKVHIIDFGIYFGLQWPCLIRRLSKREGGPPILRITGIDVPEPGfrPTERIEETGQRLAEYAKKFEVPFEYHG-IAS 542
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+++ e+L+v ++E+++Vn+ ++  +l de+v+++s+r++vL+++++++P ++++   + +++ + F +rf eal ++salfd+lea++pr
  TRIDC5BG024740.1 543 KWETIRAEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPR 635
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+ +Er l+gre+ nv+aceg++r+er et+++W+ r  +aGF + pl+++++ +ak  ++ ++ + + ++e+sg+l++gWk+r ++++
  TRIDC5BG024740.1 636 DDDQRRLIERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQDIVIKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAI 728
                       ********************************************************************888********************** PP

              GRAS 371 SaWr 374
                       + W+
  TRIDC5BG024740.1 729 TTWK 732
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    
QGSMPSGSVE HQTISGSLIH SMIQFCGAPE YFMFNDPQPV IPHHVAAEPS HNAPVATLSR  60
ATNTETDNPE DWEFISDESL NYISRMLMEE DIDEKVSVYQ EESATLRATA KPFYDILGHK  120
FPPSPDRTLT TWSLDSPSES SSSGHAQSLS SVGTSGSIGG AVHSNQCHNV GHSEQLEAYR  180
GLCGRSSQPL VAPSSGVSDA AESLEDPLIT NGRIPEYLFE SLPTWDFRRG VEEAQKFLPG  240
GDKLVIDLEA AGVSKPQEAV KAIPFNVSRT EVLKAKKNRQ SEDLDLIEGR NIKQSAFCSD  300
EPDDWVEMFD DLFRQTEKKA TVLREKMRSE ASKNSQVTQA KGTTGVKTRG RKPTKNDVVD  360
LRTILIHCAQ AVAADDRRTA NELLKQIKQH SKVNGDGSQR LAFCFAQGLE ARLAGTGSQQ  420
YHRLVAKRTT ASDMLKGYHL YFAACPFKRL SHFLSNQTIL SMTKNAKKVH IIDFGIYFGL  480
QWPCLIRRLS KREGGPPILR ITGIDVPEPG FRPTERIEET GQRLAEYAKK FEVPFEYHGI  540
ASKWETIRAE DLKVGKDEVV IVNCLYRFRN LIDETVAVDS PRNRVLNTIR QVNPAIFIHG  600
IVNGSYSVPF FITRFREALF HFSALFDMLE ATVPRDDDQR RLIERDLFGR EALNVIACEG  660
SDRVERPETY KQWQVRNLRA GFVQSPLNQD IVIKAKDKVK DIYHKDFVID EDSGWLLQGW  720
KGRIIYAITT WKHNNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-173GRAS family protein