PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 710aa MW: 79049.1 Da PI: 6.7534

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.4	5.6e-14	165	243	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++ + g +++ +C ++gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.9 165 DFYNLYSWEMGFGIRYGKSRRNAKGG-KCMQEITCVNSGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 243 6*******************8888.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MEAVRRAFPG QDFAIDVVNR AFGRRNPEER SQQDSSACGI SGACTSEKPV DLKQAENAGK 60 SCAQQDPSAS EMQLRSQEAE QAGQRCDAPP APADVGAEAG GGWNRRYAKI DLEVRRGRIP 120 DEREPDAQRV SALEKALTGF AERQTDVVVN PTVGTCFDSI TEAYDFYNLY SWEMGFGIRY 180 GKSRRNAKGG KCMQEITCVN SGKPNMGGKS RRCECTALIR LLRTDDNGWY VTQHRKVHNH 240 AFSTTYGNKV HWPSHKHLDK YTRDLVRQLR HNNVNLGVYD TIASFFGRME NVPFSKRSIR 300 TLCGEVIREQ ADGDARKTME TAVASGERPE NHTGEETTFN CLDLASTTLG SPNTPVDPLR 360 YPEQDDPHSN AEAGRLADLL LAFGDCHLVL KSCTYDDLIN SNGTMSGLEE AVKAVTPHRQ 420 QGIFGDLWSR AHNSGGVVSA QVLTIKDLFR FTRWLTTTTG QHNLRCVQQR VKLVNSGKAV 480 LEPEQIALLH LYQAENDEYS VKMNKLQGER DAKIAHYMAK IDEARKSFEV SIQAAKQHYP 540 VSASYVALDS NELRGQCWTM YLAQCRKEAK DLNAKASNIV EKYGPEVIQR HLFEFCSQET 600 NRQALLKYAQ TKVNKLKEAG GAREDTLHDY MTLLEIEKAY ALLAAEEQIA NGPDTCGGSE 660 DADHGNRNNT IARGEAAEGA RGDGHDGGEG ASEGPPRQKR QRNDQDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MEAVRRAFPG QDFAIDVVNR AFGRRNPEER SQQDSSACGI SGACTSEKPV DLKQAENAGK  60
SCAQQDPSAS EMQLRSQEAE QAGQRCDAPP APADVGAEAG GGWNRRYAKI DLEVRRGRIP  120
DEREPDAQRV SALEKALTGF AERQTDVVVN PTVGTCFDSI TEAYDFYNLY SWEMGFGIRY  180
GKSRRNAKGG KCMQEITCVN SGKPNMGGKS RRCECTALIR LLRTDDNGWY VTQHRKVHNH  240
AFSTTYGNKV HWPSHKHLDK YTRDLVRQLR HNNVNLGVYD TIASFFGRME NVPFSKRSIR  300
TLCGEVIREQ ADGDARKTME TAVASGERPE NHTGEETTFN CLDLASTTLG SPNTPVDPLR  360
YPEQDDPHSN AEAGRLADLL LAFGDCHLVL KSCTYDDLIN SNGTMSGLEE AVKAVTPHRQ  420
QGIFGDLWSR AHNSGGVVSA QVLTIKDLFR FTRWLTTTTG QHNLRCVQQR VKLVNSGKAV  480
LEPEQIALLH LYQAENDEYS VKMNKLQGER DAKIAHYMAK IDEARKSFEV SIQAAKQHYP  540
VSASYVALDS NELRGQCWTM YLAQCRKEAK DLNAKASNIV EKYGPEVIQR HLFEFCSQET  600
NRQALLKYAQ TKVNKLKEAG GAREDTLHDY MTLLEIEKAY ALLAAEEQIA NGPDTCGGSE  660
DADHGNRNNT IARGEAAEGA RGDGHDGGEG ASEGPPRQKR QRNDQDYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	8e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.9