PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 612aa MW: 68805.2 Da PI: 7.7089

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.7	4.5e-14	67	145	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++ + g +++ +C ++gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.7 67 DFYNLYSWEMGFGIRYGKSRRNAKGG-KCMQEITCVNSGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 145 6*******************8888.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 612 aa Download sequence
MPRLTLRFYG IAMRKVRRGR IPDEREPDAQ RVSALEKALT GFAERQTDVV VNPTVGTCFD 60 SITEAYDFYN LYSWEMGFGI RYGKSRRNAK GGKCMQEITC VNSGKPNMGG KSRRCECTAL 120 IRLLRTDDNG WYVTQHRKVH NHAFSTTYGN KVHWPSHKHL DKYTRDLVRQ LRHNNVNLGV 180 YDTIASFFGR MENVPFSKRS IRTLCGEVIR EQADGDARKT METAVASGER PENHTGEETT 240 FNCLDLASTT LGSPNTPVDP LRYPEQDDPH SNAEAGRLAD LLLAFGDCHL VLKSCTYDDL 300 INSNGTMSGL EEAVKAVTPH RQQGIFGDLW SRAHNSGGVV SAQVLTIKDL FRFTRWLTTT 360 TGQHNLRCVQ QRVKLVNSGK AVLEPEQIAL LHLYQAENDE YSVKMNKLQG ERDAKIAHYM 420 AKIDEARKSF EVSIQAAKQH YPVSASYVAL DSNELRGQCW TMYLAQCRKE AKDLNAKASN 480 IVEKYGPEVI QRHLFEFCSQ ETNRQALLKY AQTKVNKLKE AGGAREDTLH DYMTLLEIEK 540 AYALLAAEEQ IANGPDTCGG SEDADHGNRN NTIARGEAAE GARGDGHDGG EGASEGPPRQ 600 KRQRNDQDYV WW

Sequence ? help Back to Top

Protein Sequence Length: 612 aa Download sequence

MPRLTLRFYG IAMRKVRRGR IPDEREPDAQ RVSALEKALT GFAERQTDVV VNPTVGTCFD  60
SITEAYDFYN LYSWEMGFGI RYGKSRRNAK GGKCMQEITC VNSGKPNMGG KSRRCECTAL  120
IRLLRTDDNG WYVTQHRKVH NHAFSTTYGN KVHWPSHKHL DKYTRDLVRQ LRHNNVNLGV  180
YDTIASFFGR MENVPFSKRS IRTLCGEVIR EQADGDARKT METAVASGER PENHTGEETT  240
FNCLDLASTT LGSPNTPVDP LRYPEQDDPH SNAEAGRLAD LLLAFGDCHL VLKSCTYDDL  300
INSNGTMSGL EEAVKAVTPH RQQGIFGDLW SRAHNSGGVV SAQVLTIKDL FRFTRWLTTT  360
TGQHNLRCVQ QRVKLVNSGK AVLEPEQIAL LHLYQAENDE YSVKMNKLQG ERDAKIAHYM  420
AKIDEARKSF EVSIQAAKQH YPVSASYVAL DSNELRGQCW TMYLAQCRKE AKDLNAKASN  480
IVEKYGPEVI QRHLFEFCSQ ETNRQALLKY AQTKVNKLKE AGGAREDTLH DYMTLLEIEK  540
AYALLAAEEQ IANGPDTCGG SEDADHGNRN NTIARGEAAE GARGDGHDGG EGASEGPPRQ  600
KRQRNDQDYV WW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	5e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.7