PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 727aa MW: 80653.8 Da PI: 6.6705

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.3	5.8e-14	182	260	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++ + g +++ +C ++gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.6 182 DFYNLYSWEMGFGIRYGKSRRNAKGG-KCMQEITCVNSGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 260 6*******************8888.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
EDPPPNPRRP LSGSPLALGL GEDAMEAVRR AFPGQDFAID VVNRAFGRRN PEERSQQDSS 60 ACGISGACTS EKPVDLKQAE NAGKSCAQQD PSASEMQLRS QEAEQAGQRC DAPPAPADVG 120 AEAGGGWNRR VRRGRIPDER EPDAQRVSAL EKALTGFAER QTDVVVNPTV GTCFDSITEA 180 YDFYNLYSWE MGFGIRYGKS RRNAKGGKCM QEITCVNSGK PNMGGKSRRC ECTALIRLLR 240 TDDNGWYVTQ HRKVHNHAFS TTYGNKVHWP SHKHLDKYTR DLVRQLRHNN VNLGVYDTIA 300 SFFGRMENVP FSKRSIRTLC GEVIREQADG DARKTMETAV ASGERPENHT GEETTFNCLD 360 LASTTLGSPN TPVDPLRYPE QDDPHSNAEA GRLADLLLAF GDCHLVLKSC TYDDLINSNG 420 TMSGLEEAVK AVTPHRQQGI FGDLWSRAHN SGGVVSAQVL TIKDLFRFTR WLTTTTGQHN 480 LRCVQQRVKL VNSGKAVLEP EQIALLHLYQ AENDEYSVKM NKLQGERDAK IAHYMAKIDE 540 ARKSFEVSIQ AAKQHYPVSA SYVALDSNEL RGQCWTMYLA QCRKEAKDLN AKASNIVEKY 600 GPEVIQRHLF EFCSQETNRQ ALLKYAQTKV NKLKEAGGAR EDTLHDYMTL LEIEKAYALL 660 AAEEQIANGP DTCGGSEDAD HGNRNNTIAR GEAAEGARGD GHDGGEGASE GPPRQKRQRN 720 DQDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

EDPPPNPRRP LSGSPLALGL GEDAMEAVRR AFPGQDFAID VVNRAFGRRN PEERSQQDSS  60
ACGISGACTS EKPVDLKQAE NAGKSCAQQD PSASEMQLRS QEAEQAGQRC DAPPAPADVG  120
AEAGGGWNRR VRRGRIPDER EPDAQRVSAL EKALTGFAER QTDVVVNPTV GTCFDSITEA  180
YDFYNLYSWE MGFGIRYGKS RRNAKGGKCM QEITCVNSGK PNMGGKSRRC ECTALIRLLR  240
TDDNGWYVTQ HRKVHNHAFS TTYGNKVHWP SHKHLDKYTR DLVRQLRHNN VNLGVYDTIA  300
SFFGRMENVP FSKRSIRTLC GEVIREQADG DARKTMETAV ASGERPENHT GEETTFNCLD  360
LASTTLGSPN TPVDPLRYPE QDDPHSNAEA GRLADLLLAF GDCHLVLKSC TYDDLINSNG  420
TMSGLEEAVK AVTPHRQQGI FGDLWSRAHN SGGVVSAQVL TIKDLFRFTR WLTTTTGQHN  480
LRCVQQRVKL VNSGKAVLEP EQIALLHLYQ AENDEYSVKM NKLQGERDAK IAHYMAKIDE  540
ARKSFEVSIQ AAKQHYPVSA SYVALDSNEL RGQCWTMYLA QCRKEAKDLN AKASNIVEKY  600
GPEVIQRHLF EFCSQETNRQ ALLKYAQTKV NKLKEAGGAR EDTLHDYMTL LEIEKAYALL  660
AAEEQIANGP DTCGGSEDAD HGNRNNTIAR GEAAEGARGD GHDGGEGASE GPPRQKRQRN  720
DQDYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	9e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.6