PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 505aa MW: 56633.2 Da PI: 6.9478

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.6e-07	4	38	56	90
FAR1 56 aetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.5 4 KSRRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 38 5789****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MGGKSRRCEC TALIRLLRTD DNGWYVTQHR KVHNHAFSTT YGNKVHWPSH KHLDKYTRDL 60 VRQLRHNNVN LGVYDTIASF FGRMENVPFS KRSIRTLCGE VIREQADGDA RKTMETAVAS 120 GERPENHTGE ETTFNCLDLA STTLGSPNTP VDPLRYPEQD DPHSNAEAGR LADLLLAFGD 180 CHLVLKSCTY DDLINSNGTM SGLEEAVKAV TPHRQQGIFG DLWSRAHNSG GVVSAQVLTI 240 KDLFRFTRWL TTTTGQHNLR CVQQRVKLVN SGKAVLEPEQ IALLHLYQAE NDEYSVKMNK 300 LQGERDAKIA HYMAKIDEAR KSFEVSIQAA KQHYPVSASY VALDSNELRG QCWTMYLAQC 360 RKEAKDLNAK ASNIVEKYGP EVIQRHLFEF CSQETNRQAL LKYAQTKVNK LKEAGGARED 420 TLHDYMTLLE IEKAYALLAA EEQIANGPDT CGGSEDADHG NRNNTIARGE AAEGARGDGH 480 DGGEGASEGP PRQKRQRNDQ DYVWW

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MGGKSRRCEC TALIRLLRTD DNGWYVTQHR KVHNHAFSTT YGNKVHWPSH KHLDKYTRDL  60
VRQLRHNNVN LGVYDTIASF FGRMENVPFS KRSIRTLCGE VIREQADGDA RKTMETAVAS  120
GERPENHTGE ETTFNCLDLA STTLGSPNTP VDPLRYPEQD DPHSNAEAGR LADLLLAFGD  180
CHLVLKSCTY DDLINSNGTM SGLEEAVKAV TPHRQQGIFG DLWSRAHNSG GVVSAQVLTI  240
KDLFRFTRWL TTTTGQHNLR CVQQRVKLVN SGKAVLEPEQ IALLHLYQAE NDEYSVKMNK  300
LQGERDAKIA HYMAKIDEAR KSFEVSIQAA KQHYPVSASY VALDSNELRG QCWTMYLAQC  360
RKEAKDLNAK ASNIVEKYGP EVIQRHLFEF CSQETNRQAL LKYAQTKVNK LKEAGGARED  420
TLHDYMTLLE IEKAYALLAA EEQIANGPDT CGGSEDADHG NRNNTIARGE AAEGARGDGH  480
DGGEGASEGP PRQKRQRNDQ DYVWW

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.5