PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 537aa MW: 60104.3 Da PI: 7.7323

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.7	1e-09	1	70	10	90
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +GF +r ks+++ + g +++ +C ++gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.4 1 MGFGIRYGKSRRNAKGG-KCMQEITCVNSGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 70 7**********8887.667899****998877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MGFGIRYGKS RRNAKGGKCM QEITCVNSGK PNMGGKSRRC ECTALIRLLR TDDNGWYVTQ 60 HRKVHNHAFS TTYGNKVHWP SHKHLDKYTR DLVRQLRHNN VNLGVYDTIA SFFGRMENVP 120 FSKRSIRTLC GEVIREQADG DARKTMETAV ASGERPENHT GEETTFNCLD LASTTLGSPN 180 TPVDPLRYPE QDDPHSNAEA GRLADLLLAF GDCHLVLKSC TYDDLINSNG TMSGLEEAVK 240 AVTPHRQQGI FGDLWSRAHN SGGVVSAQVL TIKDLFRFTR WLTTTTGQHN LRCVQQRVKL 300 VNSGKAVLEP EQIALLHLYQ AENDEYSVKM NKLQGERDAK IAHYMAKIDE ARKSFEVSIQ 360 AAKQHYPVSA SYVALDSNEL RGQCWTMYLA QCRKEAKDLN AKASNIVEKY GPEVIQRHLF 420 EFCSQETNRQ ALLKYAQTKV NKLKEAGGAR EDTLHDYMTL LEIEKAYALL AAEEQIANGP 480 DTCGGSEDAD HGNRNNTIAR GEAAEGARGD GHDGGEGASE GPPRQKRQRN DQDYVWW

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MGFGIRYGKS RRNAKGGKCM QEITCVNSGK PNMGGKSRRC ECTALIRLLR TDDNGWYVTQ  60
HRKVHNHAFS TTYGNKVHWP SHKHLDKYTR DLVRQLRHNN VNLGVYDTIA SFFGRMENVP  120
FSKRSIRTLC GEVIREQADG DARKTMETAV ASGERPENHT GEETTFNCLD LASTTLGSPN  180
TPVDPLRYPE QDDPHSNAEA GRLADLLLAF GDCHLVLKSC TYDDLINSNG TMSGLEEAVK  240
AVTPHRQQGI FGDLWSRAHN SGGVVSAQVL TIKDLFRFTR WLTTTTGQHN LRCVQQRVKL  300
VNSGKAVLEP EQIALLHLYQ AENDEYSVKM NKLQGERDAK IAHYMAKIDE ARKSFEVSIQ  360
AAKQHYPVSA SYVALDSNEL RGQCWTMYLA QCRKEAKDLN AKASNIVEKY GPEVIQRHLF  420
EFCSQETNRQ ALLKYAQTKV NKLKEAGGAR EDTLHDYMTL LEIEKAYALL AAEEQIANGP  480
DTCGGSEDAD HGNRNNTIAR GEAAEGARGD GHDGGEGASE GPPRQKRQRN DQDYVWW

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.4