PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG023800.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 725aa MW: 80568.8 Da PI: 6.7827

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG023800.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.3	5.8e-14	180	258	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+++ + g +++ +C ++gk++ k+ r++C+a +++ +++d+ w+vt+ ++ HnH+++ TRIDC5BG023800.3 180 DFYNLYSWEMGFGIRYGKSRRNAKGG-KCMQEITCVNSGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 258 6*******************8888.66789******98877..........9***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MLLISFWHRS GSPLALGLGE DAMEAVRRAF PGQDFAIDVV NRAFGRRNPE ERSQQDSSAC 60 GISGACTSEK PVDLKQAENA GKSCAQQDPS ASEMQLRSQE AEQAGQRCDA PPAPADVGAE 120 AGGGWNRRVR RGRIPDEREP DAQRVSALEK ALTGFAERQT DVVVNPTVGT CFDSITEAYD 180 FYNLYSWEMG FGIRYGKSRR NAKGGKCMQE ITCVNSGKPN MGGKSRRCEC TALIRLLRTD 240 DNGWYVTQHR KVHNHAFSTT YGNKVHWPSH KHLDKYTRDL VRQLRHNNVN LGVYDTIASF 300 FGRMENVPFS KRSIRTLCGE VIREQADGDA RKTMETAVAS GERPENHTGE ETTFNCLDLA 360 STTLGSPNTP VDPLRYPEQD DPHSNAEAGR LADLLLAFGD CHLVLKSCTY DDLINSNGTM 420 SGLEEAVKAV TPHRQQGIFG DLWSRAHNSG GVVSAQVLTI KDLFRFTRWL TTTTGQHNLR 480 CVQQRVKLVN SGKAVLEPEQ IALLHLYQAE NDEYSVKMNK LQGERDAKIA HYMAKIDEAR 540 KSFEVSIQAA KQHYPVSASY VALDSNELRG QCWTMYLAQC RKEAKDLNAK ASNIVEKYGP 600 EVIQRHLFEF CSQETNRQAL LKYAQTKVNK LKEAGGARED TLHDYMTLLE IEKAYALLAA 660 EEQIANGPDT CGGSEDADHG NRNNTIARGE AAEGARGDGH DGGEGASEGP PRQKRQRNDQ 720 DYVWW

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MLLISFWHRS GSPLALGLGE DAMEAVRRAF PGQDFAIDVV NRAFGRRNPE ERSQQDSSAC  60
GISGACTSEK PVDLKQAENA GKSCAQQDPS ASEMQLRSQE AEQAGQRCDA PPAPADVGAE  120
AGGGWNRRVR RGRIPDEREP DAQRVSALEK ALTGFAERQT DVVVNPTVGT CFDSITEAYD  180
FYNLYSWEMG FGIRYGKSRR NAKGGKCMQE ITCVNSGKPN MGGKSRRCEC TALIRLLRTD  240
DNGWYVTQHR KVHNHAFSTT YGNKVHWPSH KHLDKYTRDL VRQLRHNNVN LGVYDTIASF  300
FGRMENVPFS KRSIRTLCGE VIREQADGDA RKTMETAVAS GERPENHTGE ETTFNCLDLA  360
STTLGSPNTP VDPLRYPEQD DPHSNAEAGR LADLLLAFGD CHLVLKSCTY DDLINSNGTM  420
SGLEEAVKAV TPHRQQGIFG DLWSRAHNSG GVVSAQVLTI KDLFRFTRWL TTTTGQHNLR  480
CVQQRVKLVN SGKAVLEPEQ IALLHLYQAE NDEYSVKMNK LQGERDAKIA HYMAKIDEAR  540
KSFEVSIQAA KQHYPVSASY VALDSNELRG QCWTMYLAQC RKEAKDLNAK ASNIVEKYGP  600
EVIQRHLFEF CSQETNRQAL LKYAQTKVNK LKEAGGARED TLHDYMTLLE IEKAYALLAA  660
EEQIANGPDT CGGSEDADHG NRNNTIARGE AAEGARGDGH DGGEGASEGP PRQKRQRNDQ  720
DYVWW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	7e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG023800.3