PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG023750.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 540aa    MW: 59204.9 Da    PI: 6.8241
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG023750.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3497.7e-107875281374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                       l++lL++cA  v++g++ +a+ +L+++ +las d+  ++qRlaa+f+ ALa +l++  ++l++al +s++s+ +   + aa++  +++ P+lk
  TRIDC5BG023750.1  87 LISLLYQCASEVAAGEFDRANLCLEHIMQLASLDApHTLQRLAAVFADALACKLLKLLPGLSRALLSSSSSD-DAHLVPAARRHMFDMLPFLK 178
                       5799*******************************99****************************9888874.5555567888999******* PP

              GRAS  93 fshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       +++lt+N+aI ea+ege+ vH++D++  + +++QW+aL++a+  R++g+p+lRiT+v++    ske l  +   L + Ae++++pf+fn+ v+
  TRIDC5BG023750.1 179 LAYLTTNHAIIEAMEGERFVHVVDLSgpAANPAQWIALFHAFRGRRDGTPNLRITAVHE----SKEFLAGMSAVLVREAEAFDIPFQFNA-VE 266
                       *************************866899****************************....9**************************.79 PP

              GRAS 184 krledleleeL....rvkpgEalaVnlvlqlhrll.......................................................... 214
                        rled++l++L    rv++gEalaV+++lqlhrll                                                          
  TRIDC5BG023750.1 267 ARLEDMDLDALrhnlRVRSGEALAVSVALQLHRLLaaddtggrrqggltplqivarsspssfgellerelntrlqlspdasafssmspqspig 359
                       9999999987755447888************************************************************************** PP

              GRAS 215 .......desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres....eerikvErellgreivn 296
                              +++ +    + ++L++vk lsPk++vv+eqea+hn++ F erf eal+yy++lfd+le  ++++      er+ vEr +lg+ei++
  TRIDC5BG023750.1 360 ghfpaggQQRPK----IGSFLSAVKALSPKIMVVTEQEANHNGAAFHERFDEALNYYASLFDCLERAAAAQRgsaaAERARVERSVLGEEIRS 448
                       *99755444444....556*********************************************7776555445889**************** PP

              GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee..sgslvlgWkdrpLvsvSaWr 374
                       +vaceg er+erhe++++W  r+e+aG++ v ls++ a++a+ ll++ ++ gy+v ++   ++++l+W+++pL++v+aWr
  TRIDC5BG023750.1 449 IVACEGGERKERHERARQWAGRMEAAGMERVGLSYSGAMEARKLLQRSGWGGYEVRHDaeGHCFFLCWHKKPLYAVTAWR 528
                       *******************************************************9553378999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    
NGVEQCPWLD SLDNLNYSLQ GVEPRTWGGI ASIMFQQQQQ PQRQQQQEDV MSSATSSPAS  60
TLYSPTPYAF AGTSVQELSS DQCSVRLISL LYQCASEVAA GEFDRANLCL EHIMQLASLD  120
APHTLQRLAA VFADALACKL LKLLPGLSRA LLSSSSSDDA HLVPAARRHM FDMLPFLKLA  180
YLTTNHAIIE AMEGERFVHV VDLSGPAANP AQWIALFHAF RGRRDGTPNL RITAVHESKE  240
FLAGMSAVLV REAEAFDIPF QFNAVEARLE DMDLDALRHN LRVRSGEALA VSVALQLHRL  300
LAADDTGGRR QGGLTPLQIV ARSSPSSFGE LLERELNTRL QLSPDASAFS SMSPQSPIGG  360
HFPAGGQQRP KIGSFLSAVK ALSPKIMVVT EQEANHNGAA FHERFDEALN YYASLFDCLE  420
RAAAAQRGSA AAERARVERS VLGEEIRSIV ACEGGERKER HERARQWAGR MEAAGMERVG  480
LSYSGAMEAR KLLQRSGWGG YEVRHDAEGH CFFLCWHKKP LYAVTAWRPA GYHHSGGARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-104GRAS family protein