PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG022160.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 25441.5 Da PI: 10.0809 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128.2 | 6.3e-40 | 22 | 161 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +pGfrF Pt++el+ +yL+++++g++ ++++vi+ vd+y+++P++L++ + ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ TRIDC5BG022160.4 22 TPGFRFYPTEDELLGFYLRHRLAGTTrSHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 114 69*********************9995666778**************8434532223566********************************* PP NAM 90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s+ +++++g+k+t+vfy+grap+g kt+W m+ey++ TRIDC5BG022160.4 115 SCVFSSssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 161 ****99888888877777***************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
IKLAMMTTTS SGGAGGDLLV STPGFRFYPT EDELLGFYLR HRLAGTTRSH VDRVIPVVDV 60 YSHHPSHLRS MAGEASVQDA EQWFFFCPRA ERELRGGRPA RTTPSGYWKA TGSPSCVFSS 120 SSSSAAAGNS KVIGVKRTMV FYQGRAPTGA KTTWKMNEYK AVAADNDLRN EFSVCRLYIS 180 TGTLRSFDRR PLNTSGNGQA AARRHVPSAA NTASIGQAGN YQVFLEHDLP SGAVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-69 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG022160.4 |