PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG022160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 239aa    MW: 26133.3 Da    PI: 10.2981
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG022160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM128.26.6e-40181572128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +pGfrF Pt++el+ +yL+++++g++  ++++vi+ vd+y+++P++L++    +  ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ 
  TRIDC5BG022160.2  18 TPGFRFYPTEDELLGFYLRHRLAGTTrSHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 110
                       69*********************9995666778**************8434532223566********************************* PP

               NAM  90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s+        +++++g+k+t+vfy+grap+g kt+W m+ey++
  TRIDC5BG022160.2 111 SCVFSSssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 157
                       ****99888888877777***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MMTTTSSGGA GGDLLVSTPG FRFYPTEDEL LGFYLRHRLA GTTRSHVDRV IPVVDVYSHH  60
PSHLRSMAGE ASVQDAEQWF FFCPRAEREL RGGRPARTTP SGYWKATGSP SCVFSSSSSS  120
AAAGNSKVIG VKRTMVFYQG RAPTGAKTTW KMNEYKAVAA DNDTTTRHQT TAPLRLRNEF  180
SVCRLYISTG TLRSFDRRPL NTSGNGQAAA RRHVPSAANT ASIGQAGNYQ GWSTLFCYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-69NAC family protein