PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG022160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 263aa MW: 29088.7 Da PI: 10.2864 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 127.8 | 8.6e-40 | 18 | 157 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +pGfrF Pt++el+ +yL+++++g++ ++++vi+ vd+y+++P++L++ + ++ ++w+fF++r++++ +g r+ r+t sgyWkatg+ TRIDC5BG022160.1 18 TPGFRFYPTEDELLGFYLRHRLAGTTrSHVDRVIPVVDVYSHHPSHLRSmageASVQDAEQWFFFCPRAERELRGGRPARTTPSGYWKATGSP 110 69*********************9995666778**************8434532223566********************************* PP NAM 90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s+ +++++g+k+t+vfy+grap+g kt+W m+ey++ TRIDC5BG022160.1 111 SCVFSSssssaaagNSKVIGVKRTMVFYQGRAPTGAKTTWKMNEYKA 157 ****99888888877777***************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MMTTTSSGGA GGDLLVSTPG FRFYPTEDEL LGFYLRHRLA GTTRSHVDRV IPVVDVYSHH 60 PSHLRSMAGE ASVQDAEQWF FFCPRAEREL RGGRPARTTP SGYWKATGSP SCVFSSSSSS 120 AAAGNSKVIG VKRTMVFYQG RAPTGAKTTW KMNEYKAVAA DNDTTTRHQT TAPLRVLYQF 180 ALYFSAEERI QRVPALHQHG DAKVLRSPAP QYFRQRSSGG PPACTVGSQH RKYRTSRQLS 240 RLEHAGDHHI LGARPTLWCS SLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 4e-57 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG022160.1 |