PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG020680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 290aa    MW: 29659.5 Da    PI: 5.975
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG020680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19152201255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+ ae Aa+a++aa++ ++g
  TRIDC5BG020680.2 152 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDDAEAAARAYDAAALGFRG 201
                       8********.**********7.....337**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MCCGAEVADP GEHRRRLAAG DDDGGDGREE HALSPPPLNT TMWGRRQAQE MSAMVSALAQ  60
VVAGGVGEGV MASSTKRPAE HEAFTEEAWW STSYGGGDGD GGAPSAASSF LADYTAAPAA  120
SYSPHGAAAG DEELPSPSSA ESGGSGGTPR KRYRGVRQRP WGKWAAEIRD PHKAARVWLG  180
TFDDAEAAAR AYDAAALGFR GSRAKLNFPD DATAAAASSC TGISDATAAA ARGAAGVAGS  240
VGRAGLFPLR QVPAAEHRRL DVGGAENAGA SSDLQLRSRS ELPLAARAQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.18e-24ERF family protein