PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG019490.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 1139aa MW: 128037 Da PI: 7.2213

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG019490.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	1020	1043	1	22
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 ++C C++sFs++ +L H r TRIDC5BG019490.5 1020 FPCDieGCDMSFSSQQDLLLHKRD 1043 789999***************985 PP
2	zf-C2H2	10.7	0.0017	1103	1129	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H TRIDC5BG019490.5 1103 YECMvpGCGQTFRFVSDFSRHKRKtgH 1129 788888****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1139 aa Download sequence
AGVTTPMLYV AMLYSWFAWH VEDHELHSLN YLHFGKPKTW YGVPRDAMLA FEDAVRVHGY 60 ADDLNAIMAF QTLNQKTTVL SPEVLLSAGV PCCRLVQNPG EFVITFPGAY HCGFSHGFNC 120 GEATNIATPL WLQVAKEAAI RRASTNCGPM ISHYQLLYEL ALSLSQRRKL YETKYGELGT 180 AAFCLSPSKL QSGVTDKDKR GGLLDQGRLP CVQCGVLSFA CVAIIQPREA AVQFVLSREG 240 ISSSAKPGEV SESDGISNWI TKNIEMVPQQ GQASEALSVS LAHVSDRCGQ LYSRNNNGST 300 SALGLLASTY GSSDSEEESN QGKDNQLLET SVSFSSTVQR QRSNSHLYEE CCEAKTTTSL 360 LKSIEDNSTT ITRCGRDTDI NHLAKLREQG TTYDQCSVYI DLANDLTISG VKAYSDTHVT 420 TAKSSIEPDV LTQLKYNNDS CRMHVFCLEH ALGTWTQLQK IGGANVMLLC HPEYPRAESA 480 AKFIAEELGL KPDWKDVAFE EATDDDIRRI QLALHDEDAE PASSDWAVKM GINIYYSAKQ 540 SKSPLYSKQI PYNSIIYEAF GQENPDNLTD YGRQRSGVTK KRVAGCWCGK VWMSNQVHPF 600 LVREHEEHNH AIVCSKVMLG ANYHEIVYDE PSLTCNTMVN CSPSKRISRR KGRDSIEKSG 660 ARKKRCSAND EATLHCSSIG MNSKTISDQP RNFDDHDKHE GGKITEAPST QQYQQYTLQS 720 MNMKSSSNKP KDYKGNRNFL DLYDEANDVD CWFNIDSGDS TAIRHLEDSR QQEFGTVKAK 780 SPGKLQGNMR KSSKCKAGDD SLNGDKKVQK MNKKSISRKQ KDVEINTQFR EEYDEDNNWE 840 EVPEGKDHDV KVESRAKTRS GEDDKRNNNS HELNDEYNDM DCWHDIHRGD NATMGNLDNS 900 PVQRLEAAEV KSGGKLHCCK RKSSKGKAKD NYSNGDEKLQ MLNIESISRK QKSDSQFDEG 960 CGRDNALDSL LNDVDEATRE NCYEVREEEM DGMEVKPRGK VQTGKRKTSR CQAGDKAAKF 1020 PCDIEGCDMS FSSQQDLLLH KRDICPVKGC KKKFFCHKYL LQHRKVHMDE RPLNCEWKGC 1080 KKTFKWPWAR TEHMRVHTGV RPYECMVPGC GQTFRFVSDF SRHKRKTGHS SGKKNKEST

Sequence ? help Back to Top

Protein Sequence Length: 1139 aa Download sequence

AGVTTPMLYV AMLYSWFAWH VEDHELHSLN YLHFGKPKTW YGVPRDAMLA FEDAVRVHGY  60
ADDLNAIMAF QTLNQKTTVL SPEVLLSAGV PCCRLVQNPG EFVITFPGAY HCGFSHGFNC  120
GEATNIATPL WLQVAKEAAI RRASTNCGPM ISHYQLLYEL ALSLSQRRKL YETKYGELGT  180
AAFCLSPSKL QSGVTDKDKR GGLLDQGRLP CVQCGVLSFA CVAIIQPREA AVQFVLSREG  240
ISSSAKPGEV SESDGISNWI TKNIEMVPQQ GQASEALSVS LAHVSDRCGQ LYSRNNNGST  300
SALGLLASTY GSSDSEEESN QGKDNQLLET SVSFSSTVQR QRSNSHLYEE CCEAKTTTSL  360
LKSIEDNSTT ITRCGRDTDI NHLAKLREQG TTYDQCSVYI DLANDLTISG VKAYSDTHVT  420
TAKSSIEPDV LTQLKYNNDS CRMHVFCLEH ALGTWTQLQK IGGANVMLLC HPEYPRAESA  480
AKFIAEELGL KPDWKDVAFE EATDDDIRRI QLALHDEDAE PASSDWAVKM GINIYYSAKQ  540
SKSPLYSKQI PYNSIIYEAF GQENPDNLTD YGRQRSGVTK KRVAGCWCGK VWMSNQVHPF  600
LVREHEEHNH AIVCSKVMLG ANYHEIVYDE PSLTCNTMVN CSPSKRISRR KGRDSIEKSG  660
ARKKRCSAND EATLHCSSIG MNSKTISDQP RNFDDHDKHE GGKITEAPST QQYQQYTLQS  720
MNMKSSSNKP KDYKGNRNFL DLYDEANDVD CWFNIDSGDS TAIRHLEDSR QQEFGTVKAK  780
SPGKLQGNMR KSSKCKAGDD SLNGDKKVQK MNKKSISRKQ KDVEINTQFR EEYDEDNNWE  840
EVPEGKDHDV KVESRAKTRS GEDDKRNNNS HELNDEYNDM DCWHDIHRGD NATMGNLDNS  900
PVQRLEAAEV KSGGKLHCCK RKSSKGKAKD NYSNGDEKLQ MLNIESISRK QKSDSQFDEG  960
CGRDNALDSL LNDVDEATRE NCYEVREEEM DGMEVKPRGK VQTGKRKTSR CQAGDKAAKF  1020
PCDIEGCDMS FSSQQDLLLH KRDICPVKGC KKKFFCHKYL LQHRKVHMDE RPLNCEWKGC  1080
KKTFKWPWAR TEHMRVHTGV RPYECMVPGC GQTFRFVSDF SRHKRKTGHS SGKKNKEST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	649	665	RRKGRDSIEKSGARKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-80	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG019490.5