PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG018270.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 367aa    MW: 42255.7 Da    PI: 5.0049
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG018270.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.51.6e-16235328191
              FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +++n+Y+k +GFsv + + +++   k n+e+++ t++ +k+gk++e +k+  +  r++ +  +t+Ck  ++++++  g we+t+ +l HnHel
  TRIDC5BG018270.6 235 EYFNFYSKVAGFSVATVAISRTtsrKSNNEVKRITMKYNKWGKTKEIEKDyIVPMRKSIVIAKTDCKVVMVISEK-GGLWEITRQQLVHNHEL 326
                       59***********9765554444559999***************9988887899999****************99.****************9 PP

              FAR1  90 ap 91 
                       +p
  TRIDC5BG018270.6 327 TP 328
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
EEEEGRSNRN HKRIEGDVVP DEQQERRSSE GNQHHQPQER SMMRALTKDD LLRLSQEELI  60
LNDTLSFTAL LHSYIIYKVH SGDASTNVVE TIQQNYKSKV DGSFNTEIDN NHTLQTLEGD  120
LHHEVAESED GGGESNPWDR NLFYNLNLQQ EPEDVDIRGA GAKTNSSADH SNEEGDREEQ  180
EDSLGQDAED EFLDEDIERF LQNEQDAALE GNLMNTSSNF KPHLGMQFKT KEAQEYFNFY  240
SKVAGFSVAT VAISRTTSRK SNNEVKRITM KYNKWGKTKE IEKDYIVPMR KSIVIAKTDC  300
KVVMVISEKG GLWEITRQQL VHNHELTPNS RFFRSHKYMS DEEKCLIRVL KHTNLESRRI  360
VAVLAYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-07FAR1 family protein