PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG015910.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 497aa    MW: 55657.3 Da    PI: 7.6286
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG015910.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.8e-151562391499
                       T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  TRIDC5BG015910.8 156 SYVTIPKEYAAVHF--PHESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWIHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 239
                       4589******9997..45788******5566*******..9999***************************77665999999999987 PP
2B354.71.9e-17296392399
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       +++t+s+ ++++++ l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e + 
  TRIDC5BG015910.8 296 SIMTKSNLGSRHMVELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTV 385
                       6899********************5..34677888776.9********9999******99999**********************99899999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                        v+++rk
  TRIDC5BG015910.8 386 IVHLLRK 392
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
PSSSMDAPLT EERRAARRVR RRVCSSGLPT SLNHGESDNA QETSTHSTEI SSSDCYTQLS  60
SESSDEGCEN RSSGHRRKRR KTSVISSASE QSGQDSPSAC ESLESDDVQI TPGKDYVLPQ  120
RCDLSDAEKN RVVALIKEIK AKVTVFVAIM FRSYSSYVTI PKEYAAVHFP HESATITLRS  180
PGKNKKWHPR FYKKGTMIKL TGSWIHFVRD NDVHEGDICI FVPAKGGKPF MFTVHLLRKE  240
TTDSQTEVSH ESSECEDSHG QPPYILPYGA RLSPSQRNAV QKKVDSIQSE VPIYVSIMTK  300
SNLGSRHMVE LSKRYAAEHL PHRNVTLMFQ YMGKIWNINM LFHDRKYPKR WYLIGGWSKF  360
ISDNSLRLGD ICLFELKKDE KELTVIVHLL RKESIDHPSG GSPVLDSNYV RASTMIASTV  420
RVGEEPDDEE ETASSGREEQ GFHDEPIEHN HSEGASKAHM PTAPCSESNA SGISPSSEAR  480
EQAAGCSKQK FCNRISK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-10B3 family protein