PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG014120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 717aa    MW: 79250.5 Da    PI: 5.6644
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG014120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS352.66e-1083397111374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d + a++lL++++ +a pdgd +qRla++f+e+L+arla+++  + ++l +++ s    ++ l+a++l+  +  + k+
  TRIDC5BG014120.2 339 LRTLLIHCAQAVATDDRRSATELLKQIKLHARPDGDGTQRLAHCFAEGLQARLAGTGGLVHQSLMATRIS---AVDMLKAYQLYMAAICFKKV 428
                       6789***************************************************888888777777776...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+l  N++I++a  g++++HiiD++i++G+QWp++l+ +++Rp+gpp++RiTg++ p++g   +e++eetg+rL+k+A+e++vpfe++++++ 
  TRIDC5BG014120.2 429 SFLFSNSTIYNASLGKKKIHIIDYGIQYGFQWPCFLRRISTRPGGPPNVRITGIDLPQPGfrPTERIEETGRRLKKYAHEFNVPFEYRAIATA 521
                       ***********************************************************9*****************************9999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++e+l+ e+L+++p+E+l+Vn+ +q ++l+desv les+rd vLk +++++P+ ++++  + + +++ F++rf e l yysalfd l+++ pr
  TRIDC5BG014120.2 522 KMESLRKEDLKIDPDEVLIVNSLFQFKNLMDESVVLESPRDVVLKNIRKMRPHTFIHAIVNGSFSAPFFVTRFREVLFYYSALFDVLDTTTPR 614
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++e+r+ +E+ +lgr++ nv+aceg++r+er et+++W+ r ++aG+k +pl+ ++ + a+  +++++ + + ++ ++++l++gWk+r L+++
  TRIDC5BG014120.2 615 DNEQRMLIEQNILGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKLLPLNPEVIELARDKVKNCYHKDFVIDIDQHWLLQGWKGRILYAI 707
                       ********************************************************************889********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC5BG014120.2 708 STWT 711
                       ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
DDPSLNLYLS DLIPGSPSEY LDLPPTPHHE QEHQKPSPDG HGGGVGGGGG DSPSSTPEDL  60
VLPFISRILM EEDIDDKFFY DFPDNPALIE AQQPFLEILS DPSSNSTSDD SNNRAVSPCS  120
PSDASVGTAA QLPPTPAAVD SYDRFQFEPV DLDPAAFFGG GANSDLMSSA FLKGMQEANK  180
FLPSQDKLVI DLEASSGQFF KGVEEGNKFL PREDKLVAGF NGHAAPAPAP VVLSVKKEEA  240
VDAVSANSGG GRGRKNPYHD DELEQEGGRS SKQSALGDDV SAREMFDRML MPSDEMCIVQ  300
MQNLRIAMQE AVAKNDSGGG KGANGKGRGR RGGSDVVDLR TLLIHCAQAV ATDDRRSATE  360
LLKQIKLHAR PDGDGTQRLA HCFAEGLQAR LAGTGGLVHQ SLMATRISAV DMLKAYQLYM  420
AAICFKKVSF LFSNSTIYNA SLGKKKIHII DYGIQYGFQW PCFLRRISTR PGGPPNVRIT  480
GIDLPQPGFR PTERIEETGR RLKKYAHEFN VPFEYRAIAT AKMESLRKED LKIDPDEVLI  540
VNSLFQFKNL MDESVVLESP RDVVLKNIRK MRPHTFIHAI VNGSFSAPFF VTRFREVLFY  600
YSALFDVLDT TTPRDNEQRM LIEQNILGRA ALNVIACEGT DRVERPETYK QWQVRNQRAG  660
LKLLPLNPEV IELARDKVKN CYHKDFVIDI DQHWLLQGWK GRILYAISTW TANDASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-161GRAS family protein