PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG013820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 547aa MW: 62532.2 Da PI: 6.8895

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG013820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.3	1.2e-23	54	143	2	89
FAR1 2 fYneYAkevGFsvrkskskksk.rngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYneYA++ GF r+ +s++sk ++ +++r+fvCs+eg ++++ + + +e+r+r++ r C+a+++v +e +++w+v+kle+ HnH+l TRIDC5BG013820.1 54 FYNEYARHPGFPFRVGRSRRSKgAEEVVIMRRFVCSREGMYRKKNPSsdEATEKRERMSMREACNAMMEVVRE-SNHWVVSKLEKTHNHKL 143 *******************61566789******8777665545788999************99.9************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
DNLILEGPVI EAGVAASVGG ITEKDAMKDF VPPEDPKEPL LGMTFESDEA AKTFYNEYAR 60 HPGFPFRVGR SRRSKGAEEV VIMRRFVCSR EGMYRKKNPS SDEATEKRER MSMREACNAM 120 MEVVRESNHW VVSKLEKTHN HKLGTCSRVG YLRDRGLLDA SNKITMMGSD GVPFPRQNIL 180 GEGGDAQGLL DYLKKMQAND PAFFHAIQVD KNICLMNVFW ADARAKLAYQ HFGDAVTFDT 240 TYKKNKCMMP FVTFSGVNHH LQRVIFGCAL LMEDTECSFV WLFETWLAAM SGKAPCSLIT 300 DQNRAMKVAI GRVFPHTCHR FCKWHILSRT KHKLAHTYSE HPTSIDESES CVVESETINT 360 FETAWMSTID TYDLRNNTWL QAMYNICQKC IPLYLMDTFC AEISKAQKLE TMNDFYKKYF 420 STNVTLEVFL TQFDLSIENH YEEEAKADMD TSLNLVTTKT ASPMEKQAAR TYTKAVFSRF 480 QEEFTESLAY VIQKTKDGCI SEYNIMKDEN SSDTFRVAYN ASNKMAKCSC KYFEFSSMSY 540 SRSIQNS

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

DNLILEGPVI EAGVAASVGG ITEKDAMKDF VPPEDPKEPL LGMTFESDEA AKTFYNEYAR  60
HPGFPFRVGR SRRSKGAEEV VIMRRFVCSR EGMYRKKNPS SDEATEKRER MSMREACNAM  120
MEVVRESNHW VVSKLEKTHN HKLGTCSRVG YLRDRGLLDA SNKITMMGSD GVPFPRQNIL  180
GEGGDAQGLL DYLKKMQAND PAFFHAIQVD KNICLMNVFW ADARAKLAYQ HFGDAVTFDT  240
TYKKNKCMMP FVTFSGVNHH LQRVIFGCAL LMEDTECSFV WLFETWLAAM SGKAPCSLIT  300
DQNRAMKVAI GRVFPHTCHR FCKWHILSRT KHKLAHTYSE HPTSIDESES CVVESETINT  360
FETAWMSTID TYDLRNNTWL QAMYNICQKC IPLYLMDTFC AEISKAQKLE TMNDFYKKYF  420
STNVTLEVFL TQFDLSIENH YEEEAKADMD TSLNLVTTKT ASPMEKQAAR TYTKAVFSRF  480
QEEFTESLAY VIQKTKDGCI SEYNIMKDEN SSDTFRVAYN ASNKMAKCSC KYFEFSSMSY  540
SRSIQNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-126	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG013820.1