PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.22
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 260aa    MW: 29667.9 Da    PI: 8.6294
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.22genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.86.1e-112781794
                       E--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                 B3 17 vlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94
                       v+ k++a+++     e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.22  2 VICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 78
                       6888899888422..34457777746779999888654444.458***********************887544444444 PP
2B352.58.8e-171642511199
                        HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                         k+++l++p kfa++h ++++++  l l+  ++++W  ++ y  k +++   + W +Fv++n+L+ g ++vF+l++  s++++ v+vf k
  TRIDC5BG012020.22 164 IKNNLLTFPGKFAAKH-LVERSHDILLLRPNRSETWCARYYYHPKEQGFS-YSSWTKFVRDNKLCKGHVCVFELMKGvSKATMIVHVFTK 251
                        6899***********9.4555555566666889*******9999998875.569*********************888*********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
QVICKDYAAK YLPHEDQFIT LCHPRKSNIW LDNLKVTTDG SGMLSAGWSS FALHNELRES  60
DVCVFEVSKS AGEMTMVVHS LEGGHHLQGK EPESQNKCDY PVKGKAIKEA ESDHKHAESK  120
SNYYYSKYAK GLTGEELEEI FRSALIQQGN VVYVTILGKN QVRIKNNLLT FPGKFAAKHL  180
VERSHDILLL RPNRSETWCA RYYYHPKEQG FSYSSWTKFV RDNKLCKGHV CVFELMKGVS  240
KATMIVHVFT KVDGRFVLLD