PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 310aa    MW: 35048.4 Da    PI: 8.7381
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.54.1e-12461281194
                        HHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                        + sg lv+ k++a+++     e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.19  46 SMSGPLVICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 128
                        445679**********423..344677777477799*9999654444.458***********************887544444444 PP
2B3521.3e-162143011199
                        HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                         k+++l++p kfa++h ++++++  l l+  ++++W  ++ y  k +++   + W +Fv++n+L+ g ++vF+l++  s++++ v+vf k
  TRIDC5BG012020.19 214 IKNNLLTFPGKFAAKH-LVERSHDILLLRPNRSETWCARYYYHPKEQGFS-YSSWTKFVRDNKLCKGHVCVFELMKGvSKATMIVHVFTK 301
                        6899***********9.4555555566666889*******9999998875.569*********************888*********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
PETTEPCFVL AMGCNLTTAQ KAQIDALVKK VRPVIPFYIT AMNKTSMSGP LVICKDYAAK  60
YLPHEDQFIT LCHPRKSNIW LDNLKVTTDG SGMLSAGWSS FALHNELRES DVCVFEVSKS  120
AGEMTMVVHS LEGGHHLQGK EPESQNKCDY PVKGKAIKEA ESDHKHAESK SNYYYSKYAK  180
GLTGEELEEI FRSALIQQGN VVYVTILGKN QVRIKNNLLT FPGKFAAKHL VERSHDILLL  240
RPNRSETWCA RYYYHPKEQG FSYSSWTKFV RDNKLCKGHV CVFELMKGVS KATMIVHVFT  300
KVDGRFVLLD