PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.17
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 338aa    MW: 38637.4 Da    PI: 9.9039
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.17genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.72.5e-14481261498
                        T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +   +p kf+++++g+   s  ++le ++g+ ++v+    k  +++vl++GW  Fv+  +Lk+g f+vF+++g+s f  +v +f+
  TRIDC5BG012020.17  48 KKWAIPQKFVQNFKGQ--ISEVIKLEAPDGNIYDVQA--IKDLNKIVLASGWGVFVSFYELKAGYFLVFRYIGNSHF--KVLIFD 126
                        45689*****888888..7779***************..999999****************************9999..887775 PP
2B348.31.9e-152052851399
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        ++ + +p kf++++ g    +k ++le ++g+++++++  ++  ++++l++GW  F++a +Lke D +vF+++g+s f  +v +f+ 
  TRIDC5BG012020.17 205 RHEMNIPEKFVNNFRGR--IPKVMKLEAPDGNVYNIQV--TNDLNKITLRSGWAAFASACELKEHDLLVFSYTGNSHF--KVLIFDP 285
                        5679*******888766..7789***************..**********************************9999..9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MSKVTGVVTA SAANPFKDVR AAMHITIGVI WMIPRSTSSS AWLAISKKKW AIPQKFVQNF  60
KGQISEVIKL EAPDGNIYDV QAIKDLNKIV LASGWGVFVS FYELKAGYFL VFRYIGNSHF  120
KVLIFDFGSC CEKEVFHVLM KCGPNAQEKD TRLDRSLLSG RRYQNGGSSN GESHRRCEHC  180
DVHFYWHHMD DRQKHFLRLM VGDFRHEMNI PEKFVNNFRG RIPKVMKLEA PDGNVYNIQV  240
TNDLNKITLR SGWAAFASAC ELKEHDLLVF SYTGNSHFKV LIFDPSGCEK QLFRIVMNPA  300
PNVQENGISH DQLFQKETKR RDGGSRDNNP RKTKKMTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-18B3 family protein