PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011790.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 759aa    MW: 88193.3 Da    PI: 5.7914
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011790.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.17.9e-20158240191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p
  TRIDC5BG011790.4 158 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 240
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
AGVRNAENST EQREAYNVVD DEGSPVPLLM LPSGKEPVGK QSMTEGTLQP AGDNDQDPSS  60
DSVEKNTEGL LADGQDQQTN SVYHPLQQAE EENQLHDNVE SNEMLRNNSS SETDSDSSSG  120
SDSDSEVGKY FYPQIEQLEM AKQPEPGMKF QTLEDAHRFY NTYALLTGFE AKRGTNYMRK  180
KFHLICNRSG KSRATPDLQR KRKRKSIEKT NCQAKVIVKL TKGQWEFTTV RNEHNHPLCP  240
SASLTKFYLS HKHISTEERS FLKVLQRTRI PPNKVMKIFR RMRGSFGSIP FKKKDGTNLL  300
CAEQHRKENS DVGRMLMYFK EKELQDPSFQ CMKQTDEDNI VRSVFWTDAR SRMDYEIFGD  360
FLLFDTTYTT DRHNMLFAPI IGLNNHGRTL LLGCALLHDE STETYKWMFE TLLHVMEDKM  420
PVSIITNQDE AMAKAIGEVM PQVRHWLCKW DVLEKAQQNI SAFIAESGNI KADLDSLVDN  480
SLTEKEFEEG WDALIERYGA SENEYLQILW QRRKNWVPVY FREDFYPFVQ SHGCDKGMNL  540
LFNDYVLSID RIEKFIERYE EIYKNITKTD EEDRLQTGTV PSCFSLQPIE KHAADIYTRQ  600
IFLKVQRELL HSTAFNVQEV QRGAVYRLNK VFNYENPEFD RNNFEVQVES GTNAFKCQCA  660
KFTRDGVLCC HIFRLFTQFG INQIPEQYIV PRWTEKFREE KEKQYKEKCS EQMDTTMRYT  720
NFMTKMADLG KTICSDGAKY DAFMLEVDKI QENFATAQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1200205RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-80FAR1 family protein