PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 436aa    MW: 49186.8 Da    PI: 8.4762
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.33.3e-14897198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      f+kv+ + +++k   + +p +f++++ g    s +++le  +g+ ++v++   k +++++l++GW +F  a +L++ D++ F ++g+s f  +v+
  TRIDC5BG011780.1  8 FVKVM-SLSNFKD-EMAIPDEFTTNFRGH--ISDKVKLEVADGNIYNVQV--AKEQDKFILRSGWVDFTGAYELQQYDSLFFIYSGDSHF--KVR 94
                      56666.6666665.5********888665..5679***************..**********************************9999..777 PP

                      EE- CS
                B3 96 vfr 98
                      +++
  TRIDC5BG011780.1 95 ILK 97
                      765 PP
2B353.83.6e-17220310390
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                        + +++ +l+ g+lv+ k+fa++h   +++++t++l   +++++W+  l++     + ++++l++GW +Fv++n+L+egD++ F+++++ ++ 
  TRIDC5BG011780.1 220 VTVMNEKSLSDGCLVICKDFAAKHL--PHQDQTIKLCYpQNSKTWDASLKVitdGACTRSCILAAGWLDFVRDNNLREGDICAFEVSKDhDRV 310
                       57789999****************5..346679999994566*******88875555555*************************98874444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MKDHDWCFVK VMSLSNFKDE MAIPDEFTTN FRGHISDKVK LEVADGNIYN VQVAKEQDKF  60
ILRSGWVDFT GAYELQQYDS LFFIYSGDSH FKVRILKPSG CEKASSCVTM SCGPNVQERV  120
ICHALSLPSI KRCRNDNWTD NSKTAKVTPT DSPSQKSSSE MNTQDVTSSK YIPEPRSSGG  180
LPGSTESRHI LEKGCILTSA QKARVDTFVK ESWTGIQFYV TVMNEKSLSD GCLVICKDFA  240
AKHLPHQDQT IKLCYPQNSK TWDASLKVIT DGACTRSCIL AAGWLDFVRD NNLREGDICA  300
FEVSKDHDRV IITVHLLKNV VVAGHTKSTS QQQKKWTHTG YVVTKYTKLT CKQKRKIEER  360
IQAIRPETRI FVSIIYSSPN SVHRSAICYR SSSTRGAVGE ASTAWEEPHL ESQALYRRQG  420
QGQMLCTTNR LEEVCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-15B3 family protein