PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG011700.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 373aa MW: 43307 Da PI: 6.7321

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG011700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.8	9.3e-14	61	143	12	99
HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++r+++p + +++ ++ + tl+ +sg++W+v + +k ++ +l GW+eF+ka +L+e+D + Fk +g+ +f v +f++ TRIDC5BG011700.1 61 FQQRISIPERMSNSFiRKIADG--GFTLKAPSGEEWRVGV--EKIADELFLMPGWEEFAKARELQENDLLFFKCSGNGSF--DVLIFDA 143 4467899998887776444444..49999*********..**99*********************9888777..9999986 PP
2	B3	46.9	5e-15	282	367	13	99
TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 +++l+++ kfa++h +g + +l l+ + ++W +k+ y ++ r + ++ W++Fv++n L+eg ++vF+l++ ++++++v+v+rk TRIDC5BG011700.1 282 NNLLIISSKFAADHlEGR--SYEMLLLRPNRKEKWCLKY-YHNRVTRGFNSRRWNKFVRDNMLREGYVCVFELMKGaTKATMTVHVLRK 367 5789********6444..333556666888***.555555556889****************99877*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
SSPSSGQLQP ADLGLWQLTG EMMVDEKGWC MRCREWQEHY YWEHMEDVSK ISFFKLMTGD 60 FQQRISIPER MSNSFIRKIA DGGFTLKAPS GEEWRVGVEK IADELFLMPG WEEFAKAREL 120 QENDLLFFKC SGNGSFDVLI FDASGCEKVS CFFANKKGTS MHKQFDNIVS QHGEKHCILS 180 DSDDTSMPLS QLVRSTHKAP TSKKPRKENE SPNSSNYYLK NEVEQEEESD DDHIQSNNYY 240 YSRIANCLTE DEREEIFGQV SIQSGNPVYV VVLQKAHVRP VNNLLIISSK FAADHLEGRS 300 YEMLLLRPNR KEKWCLKYYH NRVTRGFNSR RWNKFVRDNM LREGYVCVFE LMKGATKATM 360 TVHVLRKVDD KFV

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

SSPSSGQLQP ADLGLWQLTG EMMVDEKGWC MRCREWQEHY YWEHMEDVSK ISFFKLMTGD  60
FQQRISIPER MSNSFIRKIA DGGFTLKAPS GEEWRVGVEK IADELFLMPG WEEFAKAREL  120
QENDLLFFKC SGNGSFDVLI FDASGCEKVS CFFANKKGTS MHKQFDNIVS QHGEKHCILS  180
DSDDTSMPLS QLVRSTHKAP TSKKPRKENE SPNSSNYYLK NEVEQEEESD DDHIQSNNYY  240
YSRIANCLTE DEREEIFGQV SIQSGNPVYV VVLQKAHVRP VNNLLIISSK FAADHLEGRS  300
YEMLLLRPNR KEKWCLKYYH NRVTRGFNSR RWNKFVRDNM LREGYVCVFE LMKGATKATM  360
TVHVLRKVDD KFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	4e-30	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG011700.1