PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG010780.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 319aa MW: 34151 Da PI: 11.1764 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.1 | 2.2e-10 | 289 | 308 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 D+y+WrKYGqK++kgs++pr TRIDC5BG010780.5 289 DEYSWRKYGQKPIKGSPHPR 308 9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MEEVEAANSA AVESCHKLLA LLSQQQDPAL LRSIASETGE ACAKFRKVVS LLSNGGGGRG 60 GHARGRFSRR RKPVGFLSQK GFLESSSNTP LGMLMSGSAP TPSPSAASAA QLRPQVGAPP 120 QPRSLDLVSS SSKSAHQFGP PKMVQPLSVQ FQFGATAHRY PFQQQQQNLQ AQMFKRSNSG 180 ISLKFDSPSG GAGTISSPRS FMSSLSMDGS VASLDGKPPM RLLGGPAASD PLNVRQCAPK 240 RRCTGRGEDG SGKCTTGGKC HCSKRRKLRI KRSIKVPAIS NKISDIPPDE YSWRKYGQKP 300 IKGSPHPRYE RKKIHQLSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 4e-32 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG010780.5 |