PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG005070.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 233aa MW: 25101.7 Da PI: 6.2131 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 43 | 1.7e-13 | 1 | 112 | 33 | 102 |
TCP 33 FdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssaseceaesssssasnsssg................. 88 +d+qd+LG+d++sk+ieWL+q+a +ai+ l+++ + s+ s+g TRIDC5BG005070.3 1 YDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfafpvaspaaedtaevsT----------------SETSKGsvlslangpadndnaah 77 89*******************************998866663333333322220................22222223334444444444444 PP TCP 89 .....................kaaksaakskksqk 102 +aa + ++++++q+ TRIDC5BG005070.3 78 qasaynggsangmfagllhcsNAADKPMQHQHQQQ 112 45555566666667777555322222222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
YDIQDRLGVD QPSKAIEWLI QAAATAIDGL PSLDCSFAFP VASPAAEDTA EVSTSETSKG 60 SVLSLANGPA DNDNAAHQAS AYNGGSANGM FAGLLHCSNA ADKPMQHQHQ QQQPTLAYYA 120 APGSHIAPMS FEMIPQLTFS QDQQHCHHHH HHHHASVSFD RSTLQSNTVS TPQWPPSQHP 180 FLMQRFSAAP AEPSPMFPFF LGGNNAAAAA APAAANAPER RLQLWDFKEE RKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18390.1 | 8e-12 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG005070.3 |