PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG005070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 261aa MW: 28407.5 Da PI: 6.9646 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 102.4 | 7.7e-32 | 1 | 139 | 5 | 101 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssaseceaes 77 kdrhsk+ T++g+RdRR+Rls+++a++f+d+qd+LG+d++sk+ieWL+q+a +ai+ l+++ + TRIDC5BG005070.1 1 KDRHSKVVTSRGLRDRRIRLSVQTAIQFYDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfafpvaspaaedtaevsT----------- 82 8************************************************************998866663333333322220........... PP TCP 78 ssssasnsssg......................................kaaksaakskksq 101 s+ s+g +aa + ++++++q TRIDC5BG005070.1 83 -----SETSKGsvlslangpadndnaahqasaynggsangmfagllhcsNAADKPMQHQHQQ 139 .....222222233344444444444444555556666666777755532222222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
KDRHSKVVTS RGLRDRRIRL SVQTAIQFYD IQDRLGVDQP SKAIEWLIQA AATAIDGLPS 60 LDCSFAFPVA SPAAEDTAEV STSETSKGSV LSLANGPADN DNAAHQASAY NGGSANGMFA 120 GLLHCSNAAD KPMQHQHQQQ QPTLAYYAAP GSHIAPMSFE MIPQLTFSQD QQHCHHHHHH 180 HHASVSFDRS TLQSNTVSTP QWPPSQHPFL MQRFSAAPAE PSPMFPFFLG GNNAAAAAAP 240 AAANAPERRL QLWDFKEERK T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30210.2 | 1e-28 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG005070.1 |