PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG004480.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 178aa    MW: 19726.2 Da    PI: 10.0777
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG004480.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA93.52.6e-291669158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      d+p+YVNaKQy++Il+RR +Rak+e+e++l     kpylheSRh hA+rR+RgsgGrF
  TRIDC5BG004480.5 16 DAPIYVNAKQYEGILRRRRARAKAEKENRL----VKPYLHESRHLHAMRRARGSGGRF 69
                      68****************************....9**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MQSSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE KENRLVKPYL HESRHLHAMR  60
RARGSGGRFL NTKKETNGKD TGVGSKAMAG NPLMRPAASL SSEIQHSEQG NRSSVSSLSG  120
SEVTSLYDHE DVDHYHNFEH LRTHFFTPLP SIMDGEHGAG NPFKWAAASD GCCNLLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.33e-25NF-YA family protein