PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG004350.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 729aa MW: 84643.8 Da PI: 7.104

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG004350.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.3e-20	116	197	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.8 116 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 197 9**************9999......5789*******9998.9******************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MTEERPEPTG DSYEELSSDS IEKNTDGVLA DEADKETNSV DHSLQQAEEQ NQLHDNVENI 60 EMVNRNPSES DSDSSSGSDS DSELGKYFYP KFEELEAARK PEPGMKFQTL EDANGFYSTY 120 ALLTGFVAKR NSNYRRKKYH IECNRSGKPT PARNPNRKRK INSFERTNCQ AKVIVKLTKG 180 QWEFATVRNE HNHPLCPNPS LARFFLSQKH MSSEEKSFLK VLQQCKIPPS KILRIFRRMR 240 SSFGNKKDPV SLQCTEQRKT ENSDVESALK HFKELELRNP SFFYIKQTDE DNVVRSIFWT 300 DARSRMDYDI FGDFISVDTT YTTNRHNLPV ATIIGINNHG RTLLLGCALL RDGRAETFKW 360 MFQTLLQVMG GKIPGSIITN QDEPLGRAIA EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR 420 GNIKLELDSL VDNSLTEMEF EEGWSSLIER YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP 480 FAESLGRGEG MNIVLFRNYV LPKDRIEKFI ERYEEIQKTT LKTDDEDRRQ ARTVPSCFSL 540 QPIEKHASTI YTRQIFLKVQ RELLHSTAFD VQVVKKGSVY RLERAFNYEN PEFDRNAFEV 600 FVDPVSNTFI CQCAKFARDR LLCCHIFRLF TQLGINEIPA QYIVPRWTDK FKEEKAKQYT 660 EKCLEKADST ARYEMLMSKM ADLSKKICSD GAKCNTFMLE FDSIQEKLLA TEGENPRNSD 720 NLDSQCVGW

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MTEERPEPTG DSYEELSSDS IEKNTDGVLA DEADKETNSV DHSLQQAEEQ NQLHDNVENI  60
EMVNRNPSES DSDSSSGSDS DSELGKYFYP KFEELEAARK PEPGMKFQTL EDANGFYSTY  120
ALLTGFVAKR NSNYRRKKYH IECNRSGKPT PARNPNRKRK INSFERTNCQ AKVIVKLTKG  180
QWEFATVRNE HNHPLCPNPS LARFFLSQKH MSSEEKSFLK VLQQCKIPPS KILRIFRRMR  240
SSFGNKKDPV SLQCTEQRKT ENSDVESALK HFKELELRNP SFFYIKQTDE DNVVRSIFWT  300
DARSRMDYDI FGDFISVDTT YTTNRHNLPV ATIIGINNHG RTLLLGCALL RDGRAETFKW  360
MFQTLLQVMG GKIPGSIITN QDEPLGRAIA EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR  420
GNIKLELDSL VDNSLTEMEF EEGWSSLIER YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP  480
FAESLGRGEG MNIVLFRNYV LPKDRIEKFI ERYEEIQKTT LKTDDEDRRQ ARTVPSCFSL  540
QPIEKHASTI YTRQIFLKVQ RELLHSTAFD VQVVKKGSVY RLERAFNYEN PEFDRNAFEV  600
FVDPVSNTFI CQCAKFARDR LLCCHIFRLF TQLGINEIPA QYIVPRWTDK FKEEKAKQYT  660
EKCLEKADST ARYEMLMSKM ADLSKKICSD GAKCNTFMLE FDSIQEKLLA TEGENPRNSD  720
NLDSQCVGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	5e-73	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG004350.8