PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC5BG004350.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 751aa MW: 86841.2 Da PI: 7.4473

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG004350.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.6e-20	142	223	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.7 142 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 223 9**************9999......5789*******9998.9******************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
LQASKNAAET MSSASELSKE PVGKQSMTEE RPEPTGDSYE ELSSDSIEKN TDGVLADEAD 60 KETNSVDHSL QQAEEQNQLH DNVENIEMVN RNPSESDSDS SSGSDSDSEL GKYFYPKFEE 120 LEAARKPEPG MKFQTLEDAN GFYSTYALLT GFVAKRNSNY RRKKYHIECN RSGKPTPARN 180 PNRKRKINSF ERTNCQAKVI VKLTKGQWEF ATVRNEHNHP LCPNPSLARF FLSQKHMSSE 240 EKSFLKVLQQ CKIPPSKILR IFRRMRSSFG NIPSKKKDPV SLQCTEQRKT ENSDVESALK 300 HFKELELRNP SFFYIKQTDE DNVVRSIFWT DARSRMDYDI FGDFISVDTT YTTNRHNLPV 360 ATIIGINNHG RTLLLGCALL RDGRAETFKW MFQTLLQVMG GKIPGSIITN QDEPLGRAIA 420 EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR GNIKLELDSL VDNSLTEMEF EEGWSSLIER 480 YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP FAESLGRGEG MNIVLFRNYV LPKDRIEKFI 540 ERYEEIQKTT LKTDDEDRRQ ARTVPSCFSL QPIEKHASTI YTRQIFLKVQ RELLHSTAFD 600 VQVVKKGSVY RLERAFNYEN PEFDRNAFEV FVDPVSNTFI CQCAKFARDR LLCCHIFRLF 660 TQLGINEIPA QYIVPRWTDK FKEEKAKQYT EKCLEKADST ARYEMLMSKM ADLSKKICSD 720 GAKCNTFMLE FDSIQEKLLA TEGENPRNSD N

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

LQASKNAAET MSSASELSKE PVGKQSMTEE RPEPTGDSYE ELSSDSIEKN TDGVLADEAD  60
KETNSVDHSL QQAEEQNQLH DNVENIEMVN RNPSESDSDS SSGSDSDSEL GKYFYPKFEE  120
LEAARKPEPG MKFQTLEDAN GFYSTYALLT GFVAKRNSNY RRKKYHIECN RSGKPTPARN  180
PNRKRKINSF ERTNCQAKVI VKLTKGQWEF ATVRNEHNHP LCPNPSLARF FLSQKHMSSE  240
EKSFLKVLQQ CKIPPSKILR IFRRMRSSFG NIPSKKKDPV SLQCTEQRKT ENSDVESALK  300
HFKELELRNP SFFYIKQTDE DNVVRSIFWT DARSRMDYDI FGDFISVDTT YTTNRHNLPV  360
ATIIGINNHG RTLLLGCALL RDGRAETFKW MFQTLLQVMG GKIPGSIITN QDEPLGRAIA  420
EVLPQVRLRF WKCDVMGKAH ERIAAFMAAR GNIKLELDSL VDNSLTEMEF EEGWSSLIER  480
YDASKNEYLQ FMWRIRKIWA PVYFRQDFYP FAESLGRGEG MNIVLFRNYV LPKDRIEKFI  540
ERYEEIQKTT LKTDDEDRRQ ARTVPSCFSL QPIEKHASTI YTRQIFLKVQ RELLHSTAFD  600
VQVVKKGSVY RLERAFNYEN PEFDRNAFEV FVDPVSNTFI CQCAKFARDR LLCCHIFRLF  660
TQLGINEIPA QYIVPRWTDK FKEEKAKQYT EKCLEKADST ARYEMLMSKM ADLSKKICSD  720
GAKCNTFMLE FDSIQEKLLA TEGENPRNSD N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	8e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG004350.7