PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG004350.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 690aa MW: 80106.4 Da PI: 9.1382

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG004350.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.3	6.8e-20	55	136	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.6 55 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 136 9**************9999......5789*******9998.9******************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MVNRNPSESD SDSSSGSDSD SELGKYFYPK FEELEAARKP EPGMKFQTLE DANGFYSTYA 60 LLTGFVAKRN SNYRRKKYHI ECNRSGKPTP ARNPNRKRKI NSFERTNCQA KVIVKLTKGQ 120 WEFATVRNEH NHPLCPNPSL ARFFLSQKHM SSEEKSFLKV LQQCKIPPSK ILRIFRRMRS 180 SFGNISFKKQ GPVSSARSSS ENIPSKKKDP VSLQCTEQRK TENSDVESAL KHFKELELRN 240 PSFFYIKQTD EDNVVRSIFW TDARSRMDYD IFGDFISVDT TYTTNRHNLP VATIIGINNH 300 GRTLLLGCAL LRDGRAETFK WMFQTLLQVM GGKIPGSIIT NQDEPLGRAI AEVLPQVRLR 360 FWKCDVMGKA HERIAAFMAA RGNIKLELDS LVDNSLTEME FEEGWSSLIE RYDASKNEYL 420 QFMWRIRKIW APVYFRQDFY PFAESLGRGE GMNIVLFRNY VLPKDRIEKF IERYEEIQKT 480 TLKTDDEDRR QARTVPSCFS LQPIEKHAST IYTRQIFLKV QRELLHSTAF DVQVVKKGSV 540 YRLERAFNYE NPEFDRNAFE VFVDPVSNTF ICQCAKFARD RLLCCHIFRL FTQLGINEIP 600 AQYIVPRWTD KFKEEKAKQY TEKCLEKADS TARYEMLMSK MADLSKKICS DGAKCNTFML 660 EFDSIQEKLL ATEGENPRNS DNCMEIITTS

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MVNRNPSESD SDSSSGSDSD SELGKYFYPK FEELEAARKP EPGMKFQTLE DANGFYSTYA  60
LLTGFVAKRN SNYRRKKYHI ECNRSGKPTP ARNPNRKRKI NSFERTNCQA KVIVKLTKGQ  120
WEFATVRNEH NHPLCPNPSL ARFFLSQKHM SSEEKSFLKV LQQCKIPPSK ILRIFRRMRS  180
SFGNISFKKQ GPVSSARSSS ENIPSKKKDP VSLQCTEQRK TENSDVESAL KHFKELELRN  240
PSFFYIKQTD EDNVVRSIFW TDARSRMDYD IFGDFISVDT TYTTNRHNLP VATIIGINNH  300
GRTLLLGCAL LRDGRAETFK WMFQTLLQVM GGKIPGSIIT NQDEPLGRAI AEVLPQVRLR  360
FWKCDVMGKA HERIAAFMAA RGNIKLELDS LVDNSLTEME FEEGWSSLIE RYDASKNEYL  420
QFMWRIRKIW APVYFRQDFY PFAESLGRGE GMNIVLFRNY VLPKDRIEKF IERYEEIQKT  480
TLKTDDEDRR QARTVPSCFS LQPIEKHAST IYTRQIFLKV QRELLHSTAF DVQVVKKGSV  540
YRLERAFNYE NPEFDRNAFE VFVDPVSNTF ICQCAKFARD RLLCCHIFRL FTQLGINEIP  600
AQYIVPRWTD KFKEEKAKQY TEKCLEKADS TARYEMLMSK MADLSKKICS DGAKCNTFML  660
EFDSIQEKLL ATEGENPRNS DNCMEIITTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	8e-73	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG004350.6