PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG004350.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 820aa MW: 94367.8 Da PI: 7.8699 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63 | 8.6e-20 | 185 | 266 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.5 185 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 266 9****************9999......5789***********9998.9**********************.9****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 820 aa Download sequence |
FIMTGMVTEL DKPGAETADN STKKRRTCRV ADDQGSPVPE LHRKKASKNA AETMSSASEL 60 SKEPVGKQSM TEERPEPTGD SYEELSSDSI EKNTDGVLAD EADKETNSVD HSLQQAEEQN 120 QLHDNVENIE MVNRNPSESD SDSSSGSDSD SELGKYFYPK FEELEAARKP EPGMKFQTLE 180 DANGFYSTYA LLTGFVAKRN SNYRRKKYHI ECNRSGKPTP ARNPNRKRKI NSFERTNCQA 240 KVIVKLTKGQ WEFATVRNEH NHPLCPNPSL ARFFLSQKHM SSEEKSFLKV LQQCKIPPSK 300 ILRIFRRMRS SFGNISFKKQ GPVSSARSSS ENIPSKKKDP VSLQCTEQRK TENSDVESAL 360 KHFKELELRN PSFFYIKQTD EDNVVRSIFW TDARSRMDYD IFGDFISVDT TYTTNRHNLP 420 VATIIGINNH GRTLLLGCAL LRDGRAETFK WMFQTLLQVM GGKIPGSIIT NQDEPLGRAI 480 AEVLPQVRLR FWKCDVMGKA HERIAAFMAA RGNIKLELDS LVDNSLTEME FEEGWSSLIE 540 RYDASKNEYL QFMWRIRKIW APVYFRQDFY PFAESLGRGE GMNIVLFRNY VLPKDRIEKF 600 IERYEEIQKT TLKTDDEDRR QARTVPSCFS LQPIEKHAST IYTRQIFLKV QRELLHSTAF 660 DVQVVKKGSV YRLERAFNYE NPEFDRNAFE VFVDPVSNTF ICQCAKFARD RLLCCHIFRL 720 FTQLGINEIP AQYIVPRWTD KFKEEKAKQY TEKCLEKADS TARYEMLMSK MADLSKKICS 780 DGAKCNTFML EFDSIQEKLL ATEGENPRNS DNCMEIITTS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 48 | KKRRTCRVADDQGSPVPELHRKKASK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 2e-72 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG004350.5 |