PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG004350.5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 820aa    MW: 94367.8 Da    PI: 7.8699
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG004350.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1638.6e-20185266291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fY++YA  +GF  ++++++++      +k++  C+++gk+++ ++  +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p
  TRIDC5BG004350.5 185 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 266
                       9****************9999......5789***********9998.9**********************.9****************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 820 aa     Download sequence    
FIMTGMVTEL DKPGAETADN STKKRRTCRV ADDQGSPVPE LHRKKASKNA AETMSSASEL  60
SKEPVGKQSM TEERPEPTGD SYEELSSDSI EKNTDGVLAD EADKETNSVD HSLQQAEEQN  120
QLHDNVENIE MVNRNPSESD SDSSSGSDSD SELGKYFYPK FEELEAARKP EPGMKFQTLE  180
DANGFYSTYA LLTGFVAKRN SNYRRKKYHI ECNRSGKPTP ARNPNRKRKI NSFERTNCQA  240
KVIVKLTKGQ WEFATVRNEH NHPLCPNPSL ARFFLSQKHM SSEEKSFLKV LQQCKIPPSK  300
ILRIFRRMRS SFGNISFKKQ GPVSSARSSS ENIPSKKKDP VSLQCTEQRK TENSDVESAL  360
KHFKELELRN PSFFYIKQTD EDNVVRSIFW TDARSRMDYD IFGDFISVDT TYTTNRHNLP  420
VATIIGINNH GRTLLLGCAL LRDGRAETFK WMFQTLLQVM GGKIPGSIIT NQDEPLGRAI  480
AEVLPQVRLR FWKCDVMGKA HERIAAFMAA RGNIKLELDS LVDNSLTEME FEEGWSSLIE  540
RYDASKNEYL QFMWRIRKIW APVYFRQDFY PFAESLGRGE GMNIVLFRNY VLPKDRIEKF  600
IERYEEIQKT TLKTDDEDRR QARTVPSCFS LQPIEKHAST IYTRQIFLKV QRELLHSTAF  660
DVQVVKKGSV YRLERAFNYE NPEFDRNAFE VFVDPVSNTF ICQCAKFARD RLLCCHIFRL  720
FTQLGINEIP AQYIVPRWTD KFKEEKAKQY TEKCLEKADS TARYEMLMSK MADLSKKICS  780
DGAKCNTFML EFDSIQEKLL ATEGENPRNS DNCMEIITTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12348KKRRTCRVADDQGSPVPELHRKKASK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-72FAR1 family protein