PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5BG004350.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 832aa MW: 95592.3 Da PI: 7.9903

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG004350.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.8e-20	197	278	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.3 197 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 278 9**************9999......5789*******9998.9******************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 832 aa Download sequence
ARLLLAHAAL PPFIMTGMVT ELDKPGAETA DNSTKKRRTC RVADDQGSPV PELHRKKASK 60 NAAETMSSAS ELSKEPVGKQ SMTEERPEPT GDSYEELSSD SIEKNTDGVL ADEADKETNS 120 VDHSLQQAEE QNQLHDNVEN IEMVNRNPSE SDSDSSSGSD SDSELGKYFY PKFEELEAAR 180 KPEPGMKFQT LEDANGFYST YALLTGFVAK RNSNYRRKKY HIECNRSGKP TPARNPNRKR 240 KINSFERTNC QAKVIVKLTK GQWEFATVRN EHNHPLCPNP SLARFFLSQK HMSSEEKSFL 300 KVLQQCKIPP SKILRIFRRM RSSFGNISFK KQGPVSSARS SSENIPSKKK DPVSLQCTEQ 360 RKTENSDVES ALKHFKELEL RNPSFFYIKQ TDEDNVVRSI FWTDARSRMD YDIFGDFISV 420 DTTYTTNRHN LPVATIIGIN NHGRTLLLGC ALLRDGRAET FKWMFQTLLQ VMGGKIPGSI 480 ITNQDEPLGR AIAEVLPQVR LRFWKCDVMG KAHERIAAFM AARGNIKLEL DSLVDNSLTE 540 MEFEEGWSSL IERYDASKNE YLQFMWRIRK IWAPVYFRQD FYPFAESLGR GEGMNIVLFR 600 NYVLPKDRIE KFIERYEEIQ KTTLKTDDED RRQARTVPSC FSLQPIEKHA STIYTRQIFL 660 KVQRELLHST AFDVQVVKKG SVYRLERAFN YENPEFDRNA FEVFVDPVSN TFICQCAKFA 720 RDRLLCCHIF RLFTQLGINE IPAQYIVPRW TDKFKEEKAK QYTEKCLEKA DSTARYEMLM 780 SKMADLSKKI CSDGAKCNTF MLEFDSIQEK LLATEGENPR NSDNCMEIIT TS

Sequence ? help Back to Top

Protein Sequence Length: 832 aa Download sequence

ARLLLAHAAL PPFIMTGMVT ELDKPGAETA DNSTKKRRTC RVADDQGSPV PELHRKKASK  60
NAAETMSSAS ELSKEPVGKQ SMTEERPEPT GDSYEELSSD SIEKNTDGVL ADEADKETNS  120
VDHSLQQAEE QNQLHDNVEN IEMVNRNPSE SDSDSSSGSD SDSELGKYFY PKFEELEAAR  180
KPEPGMKFQT LEDANGFYST YALLTGFVAK RNSNYRRKKY HIECNRSGKP TPARNPNRKR  240
KINSFERTNC QAKVIVKLTK GQWEFATVRN EHNHPLCPNP SLARFFLSQK HMSSEEKSFL  300
KVLQQCKIPP SKILRIFRRM RSSFGNISFK KQGPVSSARS SSENIPSKKK DPVSLQCTEQ  360
RKTENSDVES ALKHFKELEL RNPSFFYIKQ TDEDNVVRSI FWTDARSRMD YDIFGDFISV  420
DTTYTTNRHN LPVATIIGIN NHGRTLLLGC ALLRDGRAET FKWMFQTLLQ VMGGKIPGSI  480
ITNQDEPLGR AIAEVLPQVR LRFWKCDVMG KAHERIAAFM AARGNIKLEL DSLVDNSLTE  540
MEFEEGWSSL IERYDASKNE YLQFMWRIRK IWAPVYFRQD FYPFAESLGR GEGMNIVLFR  600
NYVLPKDRIE KFIERYEEIQ KTTLKTDDED RRQARTVPSC FSLQPIEKHA STIYTRQIFL  660
KVQRELLHST AFDVQVVKKG SVYRLERAFN YENPEFDRNA FEVFVDPVSN TFICQCAKFA  720
RDRLLCCHIF RLFTQLGINE IPAQYIVPRW TDKFKEEKAK QYTEKCLEKA DSTARYEMLM  780
SKMADLSKKI CSDGAKCNTF MLEFDSIQEK LLATEGENPR NSDNCMEIIT TS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	60	KKRRTCRVADDQGSPVPELHRKKASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-72	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG004350.3