PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG004350.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 828aa MW: 95042.5 Da PI: 8.0649

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG004350.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.7e-20	193	274	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.2 193 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 274 9**************9999......5789*******9998.9******************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 828 aa Download sequence
RAAPLGSCGP ASRMVTELDK PGAETADNST KKRRTCRVAD DQGSPVPELH RKKASKNAAE 60 TMSSASELSK EPVGKQSMTE ERPEPTGDSY EELSSDSIEK NTDGVLADEA DKETNSVDHS 120 LQQAEEQNQL HDNVENIEMV NRNPSESDSD SSSGSDSDSE LGKYFYPKFE ELEAARKPEP 180 GMKFQTLEDA NGFYSTYALL TGFVAKRNSN YRRKKYHIEC NRSGKPTPAR NPNRKRKINS 240 FERTNCQAKV IVKLTKGQWE FATVRNEHNH PLCPNPSLAR FFLSQKHMSS EEKSFLKVLQ 300 QCKIPPSKIL RIFRRMRSSF GNISFKKQGP VSSARSSSEN IPSKKKDPVS LQCTEQRKTE 360 NSDVESALKH FKELELRNPS FFYIKQTDED NVVRSIFWTD ARSRMDYDIF GDFISVDTTY 420 TTNRHNLPVA TIIGINNHGR TLLLGCALLR DGRAETFKWM FQTLLQVMGG KIPGSIITNQ 480 DEPLGRAIAE VLPQVRLRFW KCDVMGKAHE RIAAFMAARG NIKLELDSLV DNSLTEMEFE 540 EGWSSLIERY DASKNEYLQF MWRIRKIWAP VYFRQDFYPF AESLGRGEGM NIVLFRNYVL 600 PKDRIEKFIE RYEEIQKTTL KTDDEDRRQA RTVPSCFSLQ PIEKHASTIY TRQIFLKVQR 660 ELLHSTAFDV QVVKKGSVYR LERAFNYENP EFDRNAFEVF VDPVSNTFIC QCAKFARDRL 720 LCCHIFRLFT QLGINEIPAQ YIVPRWTDKF KEEKAKQYTE KCLEKADSTA RYEMLMSKMA 780 DLSKKICSDG AKCNTFMLEF DSIQEKLLAT EGENPRNSDN CMEIITTS

Sequence ? help Back to Top

Protein Sequence Length: 828 aa Download sequence

RAAPLGSCGP ASRMVTELDK PGAETADNST KKRRTCRVAD DQGSPVPELH RKKASKNAAE  60
TMSSASELSK EPVGKQSMTE ERPEPTGDSY EELSSDSIEK NTDGVLADEA DKETNSVDHS  120
LQQAEEQNQL HDNVENIEMV NRNPSESDSD SSSGSDSDSE LGKYFYPKFE ELEAARKPEP  180
GMKFQTLEDA NGFYSTYALL TGFVAKRNSN YRRKKYHIEC NRSGKPTPAR NPNRKRKINS  240
FERTNCQAKV IVKLTKGQWE FATVRNEHNH PLCPNPSLAR FFLSQKHMSS EEKSFLKVLQ  300
QCKIPPSKIL RIFRRMRSSF GNISFKKQGP VSSARSSSEN IPSKKKDPVS LQCTEQRKTE  360
NSDVESALKH FKELELRNPS FFYIKQTDED NVVRSIFWTD ARSRMDYDIF GDFISVDTTY  420
TTNRHNLPVA TIIGINNHGR TLLLGCALLR DGRAETFKWM FQTLLQVMGG KIPGSIITNQ  480
DEPLGRAIAE VLPQVRLRFW KCDVMGKAHE RIAAFMAARG NIKLELDSLV DNSLTEMEFE  540
EGWSSLIERY DASKNEYLQF MWRIRKIWAP VYFRQDFYPF AESLGRGEGM NIVLFRNYVL  600
PKDRIEKFIE RYEEIQKTTL KTDDEDRRQA RTVPSCFSLQ PIEKHASTIY TRQIFLKVQR  660
ELLHSTAFDV QVVKKGSVYR LERAFNYENP EFDRNAFEVF VDPVSNTFIC QCAKFARDRL  720
LCCHIFRLFT QLGINEIPAQ YIVPRWTDKF KEEKAKQYTE KCLEKADSTA RYEMLMSKMA  780
DLSKKICSDG AKCNTFMLEF DSIQEKLLAT EGENPRNSDN CMEIITTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	56	KKRRTCRVADDQGSPVPELHRKKASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-72	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG004350.2