PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG078140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 266aa    MW: 28530 Da    PI: 5.3981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG078140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.6e-11102148555
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       h ++Er+RR+++   f  L +++P       +K +K++ L  A++Y+k+L+
  TRIDC5AG078140.1 102 HVIAERKRREKLQRQFVSLATIVPAG----VRKADKISLLGSAIDYVKQLE 148
                       899*********************96....69*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
EELAYMYQQE EPLPDHQGQY YTSFYPCRSS NSPSFGGESL NELGQPYPAL SPSANFLSFA  60
AAEASTHNFS GGSYGGLQVQ GTRQQLQAPA RRGRATASTH EHVIAERKRR EKLQRQFVSL  120
ATIVPAGVRK ADKISLLGSA IDYVKQLEEK VKALGEQGLL KSPECTLFES KCSISAADKD  180
DSAGPSGSGS SSGDSSPVDV EASTRGNTVL LKICCKERRG VLVMVLSELE NQGLSIITTN  240
VLPFTDSCLN ITITIEAGFS SAVELV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111ERKRRE
2107112RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.16e-25bHLH family protein