PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG077700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HSF | ||||||||
Protein Properties | Length: 253aa MW: 27594.6 Da PI: 5.3854 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 102.8 | 3e-32 | 15 | 107 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 F+ k+y +++d++++ ++ w gnsfvv d+ f++ +Lp +Fkh nf+SFvRQLn+YgF+kv+ ++ weF+h sF +g+++ll TRIDC5AG077700.1 15 FVAKTYGMVDDRATDAVVAWGPAGNSFVVADPFAFSQALLPAHFKHANFSSFVRQLNTYGFRKVDPDR---------WEFAHASFLRGQTHLL 98 9****************************************************************999.........**************** PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 +i r++s+ TRIDC5AG077700.1 99 PRIVRRQSS 107 ******986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
DSSSSGSGSA GVAPFVAKTY GMVDDRATDA VVAWGPAGNS FVVADPFAFS QALLPAHFKH 60 ANFSSFVRQL NTYGFRKVDP DRWEFAHASF LRGQTHLLPR IVRRQSSAKR GGKEGGEEED 120 EESSSTVLAM EVVRLRQEQR ATEERVAEMW RRVQETERRP KQMLAFLLKV VGDPDVLRRL 180 AGSSGGGQDE GAEEVKRPRL LLDADGAGVD HHHSGNLNLE EALVPEPSVD MYYAGGDGFG 240 GVQADGFHMD SGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24520.1 | 1e-61 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG077700.1 |