PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG076310.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 362aa    MW: 37529.2 Da    PI: 7.3097
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG076310.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.57.5e-18263297135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC5AG076310.2 263 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRL 297
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MAPEWEAALG MELGMGSHYH HAPPSAAASP MNHHHHHHHS AYTHSQPPHQ YHFYGGAAGG  60
DGTADPMRVD EMLDLSSHLG AHDFFSGANN GGAGQGGDNA PAPPAAAAAS SSDHQHHHPS  120
SFNLSFADEF YLPVPTEEAA ELEWLSNFVD DSYPDIPNYP PAVQAAMAAA ARNGGVVVKQ  180
ENSASAAAPG RGARSKRSRA ASAAAAAWHA LAPRQPSPSS SSSSSDSKPA RSGGGGGVKK  240
SGLVVGAAEL GGGGDQNGEV RRCTHCASEK TPQWRTGPLG PKTLCNACGV RYKSGRLVPE  300
YRPAASPTFV LTQHSNSHRK VMELRRQNEL VHLRGGVGGG VVSASSGSGG AAEHMFRDYG  360
VC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.18e-44GATA family protein