PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG075600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 214aa MW: 23308.5 Da PI: 8.0194 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.8 | 5.9e-11 | 20 | 66 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++Er RR+ +N+++ Lr+++P+ +K++Ka+i + A+ YI +Lq TRIDC5AG075600.1 20 KNIINERHRRRMLNEKLYALRRVVPNI-----TKMDKASIIQDAIAYIEELQ 66 57799*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
TSSPDGATSR STKASSLERK NIINERHRRR MLNEKLYALR RVVPNITKMD KASIIQDAIA 60 YIEELQEQER QILAALRTDS CTAVAKVDDA ASTGSNAEDH GVGSSPRKKM RRTTSASSIN 120 GAFCSPSTHP VQIFELEVTQ VAEELTMVSM RHGNSHNAIA KVCEALESLC LKIISTSITA 180 VASGIVHNMF VEAEGMHGAQ TIKEMIQTHS AISM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 7e-33 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG075600.1 |