PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073920.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 629aa MW: 69797.3 Da PI: 5.7563

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073920.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.9	1.5e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeel+ +yLk k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++ TRIDC5AG073920.3 6 LPPGFRFHPTDEELIIYYLKSKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRK 97 79**************************.99**********95334455777******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v s ++++vg+kktLv+y+grap+g++tdWvmheyrl TRIDC5AG073920.3 98 VNS-QKRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT 180 PSSVERSPTP CDGRGGGDDF ESSSFSFPTE APMTSGSMHG SGFGMQMMGG MPHEDGRWMQ 240 FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLALPPLEV EDFPHDVSLD 300 TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSSYP DMWLGAGTSS GGGHYMNELS 360 SLVDLGAAKM RRDDEPGRLV EISDMQEFKE EKKRPVENLR GVKLVNNDLG EIVVEGDESN 420 PAEGITHYPI QDTAENSGEA GQHMTDHTTD EGGIDTAPIF SQSQPDDFAL AIGFDNDGDD 480 NTNPNASLDL YGKVDVQRGL FVSRVGAAKT FFHRVEPPKK VSFHLNPAAS EVSKAIEKFH 540 YLPVTSKVSG SGSSSSRVSV FGKVKALIRG KFPTMRRPPS PLQHQRPETT VSELLQIVSL 600 LLAPKEAVTE REEEMVSRKK VKPGRRGCD

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT  180
PSSVERSPTP CDGRGGGDDF ESSSFSFPTE APMTSGSMHG SGFGMQMMGG MPHEDGRWMQ  240
FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLALPPLEV EDFPHDVSLD  300
TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSSYP DMWLGAGTSS GGGHYMNELS  360
SLVDLGAAKM RRDDEPGRLV EISDMQEFKE EKKRPVENLR GVKLVNNDLG EIVVEGDESN  420
PAEGITHYPI QDTAENSGEA GQHMTDHTTD EGGIDTAPIF SQSQPDDFAL AIGFDNDGDD  480
NTNPNASLDL YGKVDVQRGL FVSRVGAAKT FFHRVEPPKK VSFHLNPAAS EVSKAIEKFH  540
YLPVTSKVSG SGSSSSRVSV FGKVKALIRG KFPTMRRPPS PLQHQRPETT VSELLQIVSL  600
LLAPKEAVTE REEEMVSRKK VKPGRRGCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-127	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073920.3