PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG071700.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 351aa MW: 37647.3 Da PI: 4.8411

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG071700.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	182	224	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk +K++ +iL +++Y+++L TRIDC5AG071700.3 182 MAERRRRKRLNDRLSMLRSIVPKI-----TKMDRTSILGDTIDYVNEL 224 89*******************7.....6*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
DQLDEQSFLD ELMSLPREEA PAPAPAPWPA YQGSGMMTTS DLLFYGGEGA EASSGTDIAG 60 PFLQQPMAPP QAAPPHRPHE EFNFDCLSEV CNPYRSSAGV VPGPGVVHGV GQSLAQYPLH 120 DAMAENGTSG SKLHHGGGGS SSSPPFVFAG VAGEGSEMTR GVFSGAHPRS KLNGGTTSKN 180 LMAERRRRKR LNDRLSMLRS IVPKITKMDR TSILGDTIDY VNELTERIKT LEEEIGSTPE 240 ELNLLNTRKN FSGVSSEEMP MRNSTKFVIE KQVDGETRID ICCATSPGVL ISTVSALDVL 300 GLEIEQCVVS CFGDLVMQAS CSQEEGRSRV TSTDEIKRAL FTSAGYGGRC L

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

DQLDEQSFLD ELMSLPREEA PAPAPAPWPA YQGSGMMTTS DLLFYGGEGA EASSGTDIAG  60
PFLQQPMAPP QAAPPHRPHE EFNFDCLSEV CNPYRSSAGV VPGPGVVHGV GQSLAQYPLH  120
DAMAENGTSG SKLHHGGGGS SSSPPFVFAG VAGEGSEMTR GVFSGAHPRS KLNGGTTSKN  180
LMAERRRRKR LNDRLSMLRS IVPKITKMDR TSILGDTIDY VNELTERIKT LEEEIGSTPE  240
ELNLLNTRKN FSGVSSEEMP MRNSTKFVIE KQVDGETRID ICCATSPGVL ISTVSALDVL  300
GLEIEQCVVS CFGDLVMQAS CSQEEGRSRV TSTDEIKRAL FTSAGYGGRC L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	191	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	2e-56	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG071700.3