PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG070820.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 566aa MW: 62800.8 Da PI: 6.3532 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 87.5 | 1.1e-27 | 252 | 302 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC5AG070820.7 252 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 302 689**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence |
MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI 60 RLRSVKTGSM DLILEFFLPN NCINSEEQGN MLNSLSNTIQ QASCTLRVVG VKELANDGSP 120 ETSSPTPPEV CDKPAEILDE LASGIDIPAR TTSVDASEEV SSWIASLVDV QNNAAQAETD 180 CGLPFGFRKQ EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK HEEYEAKGSP FSSDRSLSNS 240 DKAIEKRRTK IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT TLKRICRHHG IDRWPSRKIK 300 KVGHSLKKLQ MVIDSVHGAE GTVRLSSLYE NFTKTTWSER ELHGDLSYPA SEQKVQLEPS 360 VPDRQCESRF SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP QQQQSSAPQL AVKQEFFMEE 420 NQSSTQMKAA SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP MANMSGMQEA KPDSLKIKAM 480 YGEERCIFRL QPSWGFEKLK EEIAKRFGIS REIYDLKYLD DESEWVLLTC DADLLECIDV 540 YKSSSAKTVR ISVNPTVQPA LRGSFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 1e-113 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG070820.7 |