PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG070820.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 664aa MW: 73665 Da PI: 6.2435

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG070820.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.2	1.4e-27	350	400	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC5AG070820.3 350 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 400 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
NYNAEIDNIC NALKQEVDLR GSDVSSDPRA QVVDTSYRAI VPEIAHVLKA VCETHKLPLA 60 QTWIPCVCQA KRASRHSDEK YKYCVSTVDE ACYVGDPAMT GFHQACSEHH LFRGEGVVGT 120 ALGTNEPCFC PDITAYSKVQ YPLSHYAKLF GLRAAVAIRL RSVKTGSMDL ILEFFLPNNC 180 INSEEQGNML NSLSNTIQQA SCTLRVVGVK ELANDGSPET SSPTPPEVCD KPAEILDELA 240 SGIDIPARTT SVDASEEVSS WIASLVDVQN NAAQAETDCG LPFGFRKQED EGFSVTAGWP 300 TSPVLVPEDK SFFPGFKKHE EYEAKGSPFS SDRSLSNSDK AIEKRRTKIE KTVSLQELRK 360 HFAGSLKEAA KNLGVCPTTL KRICRHHGID RWPSRKIKKV GHSLKKLQMV IDSVHGAEGT 420 VRLSSLYENF TKTTWSEREL HGDLSYPASE QKVQLEPSVP DRQCESRFSP HTSGSNSLSP 480 TYSQSSNSSL GCSSDPKPQQ QQSSAPQLAV KQEFFMEENQ SSTQMKAASH DELQLFTEEK 540 PVTLCRSQSH MLFSEHKPMA NMSGMQEAKP DSLKIKAMYG EERCIFRLQP SWGFEKLKEE 600 IAKRFGISRE IYDLKYLDDE SEWVLLTCDA DLLECIDVYK SSSAKTVRIS VNPTVQPALR 660 GSFG

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

NYNAEIDNIC NALKQEVDLR GSDVSSDPRA QVVDTSYRAI VPEIAHVLKA VCETHKLPLA  60
QTWIPCVCQA KRASRHSDEK YKYCVSTVDE ACYVGDPAMT GFHQACSEHH LFRGEGVVGT  120
ALGTNEPCFC PDITAYSKVQ YPLSHYAKLF GLRAAVAIRL RSVKTGSMDL ILEFFLPNNC  180
INSEEQGNML NSLSNTIQQA SCTLRVVGVK ELANDGSPET SSPTPPEVCD KPAEILDELA  240
SGIDIPARTT SVDASEEVSS WIASLVDVQN NAAQAETDCG LPFGFRKQED EGFSVTAGWP  300
TSPVLVPEDK SFFPGFKKHE EYEAKGSPFS SDRSLSNSDK AIEKRRTKIE KTVSLQELRK  360
HFAGSLKEAA KNLGVCPTTL KRICRHHGID RWPSRKIKKV GHSLKKLQMV IDSVHGAEGT  420
VRLSSLYENF TKTTWSEREL HGDLSYPASE QKVQLEPSVP DRQCESRFSP HTSGSNSLSP  480
TYSQSSNSSL GCSSDPKPQQ QQSSAPQLAV KQEFFMEENQ SSTQMKAASH DELQLFTEEK  540
PVTLCRSQSH MLFSEHKPMA NMSGMQEAKP DSLKIKAMYG EERCIFRLQP SWGFEKLKEE  600
IAKRFGISRE IYDLKYLDDE SEWVLLTCDA DLLECIDVYK SSSAKTVRIS VNPTVQPALR  660
GSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-146	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG070820.3