PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG070820.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 566aa MW: 62800.8 Da PI: 6.3532

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG070820.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.5	1.1e-27	252	302	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC5AG070820.2 252 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 302 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI 60 RLRSVKTGSM DLILEFFLPN NCINSEEQGN MLNSLSNTIQ QASCTLRVVG VKELANDGSP 120 ETSSPTPPEV CDKPAEILDE LASGIDIPAR TTSVDASEEV SSWIASLVDV QNNAAQAETD 180 CGLPFGFRKQ EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK HEEYEAKGSP FSSDRSLSNS 240 DKAIEKRRTK IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT TLKRICRHHG IDRWPSRKIK 300 KVGHSLKKLQ MVIDSVHGAE GTVRLSSLYE NFTKTTWSER ELHGDLSYPA SEQKVQLEPS 360 VPDRQCESRF SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP QQQQSSAPQL AVKQEFFMEE 420 NQSSTQMKAA SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP MANMSGMQEA KPDSLKIKAM 480 YGEERCIFRL QPSWGFEKLK EEIAKRFGIS REIYDLKYLD DESEWVLLTC DADLLECIDV 540 YKSSSAKTVR ISVNPTVQPA LRGSFG

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI  60
RLRSVKTGSM DLILEFFLPN NCINSEEQGN MLNSLSNTIQ QASCTLRVVG VKELANDGSP  120
ETSSPTPPEV CDKPAEILDE LASGIDIPAR TTSVDASEEV SSWIASLVDV QNNAAQAETD  180
CGLPFGFRKQ EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK HEEYEAKGSP FSSDRSLSNS  240
DKAIEKRRTK IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT TLKRICRHHG IDRWPSRKIK  300
KVGHSLKKLQ MVIDSVHGAE GTVRLSSLYE NFTKTTWSER ELHGDLSYPA SEQKVQLEPS  360
VPDRQCESRF SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP QQQQSSAPQL AVKQEFFMEE  420
NQSSTQMKAA SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP MANMSGMQEA KPDSLKIKAM  480
YGEERCIFRL QPSWGFEKLK EEIAKRFGIS REIYDLKYLD DESEWVLLTC DADLLECIDV  540
YKSSSAKTVR ISVNPTVQPA LRGSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-113	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG070820.2