PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG070270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 270aa    MW: 29826.4 Da    PI: 6.6183
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG070270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.86.1e-12147226291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                        Yn Y+ e GF +r  ks+ +  ++   +++ vC ++gk+  e+++         + r++C a +++ +++d+ w++++ +  HnH+l+p
  TRIDC5AG070270.1 147 IYNLYSWEKGFGIRYGKSRLN-VERIKCMQEIVCGCSGKAGVENTR---------SCRCECPALVRLLRREDNGWYIAEHRDTHNHSLSP 226
                       7****************9998.455567889999999999886555.........99******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
GVPDATYKSI GFACASGRSN FLEEVGESLV PEPEGAPAVD VEMEAAQVTE GQQVAVEDHQ  60
AATVEAQEVR DVSPPSSELS TGKMNPKAPG WNKRLRIGAA APSRPPCPNR VSAFEKAVRN  120
YAENPRDNVI TPTIGTTFDS VGEAYDIYNL YSWEKGFGIR YGKSRLNVER IKCMQEIVCG  180
CSGKAGVENT RSCRCECPAL VRLLRREDNG WYIAEHRDTH NHSLSPNFGE TLHWPSHKHI  240
DVYTRDLVKQ LRQNNVNLSK VYSIIGGFFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.14e-11FAR1 family protein